Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26945 and AO356_26950 are separated by 166 nucleotides AO356_26950 and AO356_26955 overlap by 4 nucleotides
AO356_26945: AO356_26945 - hypothetical protein, at 6,134,580 to 6,135,191
_26945
AO356_26950: AO356_26950 - ATP-dependent DNA ligase, at 6,135,358 to 6,137,970
_26950
AO356_26955: AO356_26955 - carboxylate--amine ligase, at 6,137,967 to 6,139,130
_26955
Position (kb)
6135
6136
6137
6138 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6134.501 kb on - strand at 6134.501 kb on - strand at 6134.667 kb on + strand, within AO356_26945 at 6134.809 kb on - strand, within AO356_26945 at 6134.916 kb on + strand, within AO356_26945 at 6134.916 kb on + strand, within AO356_26945 at 6134.917 kb on - strand, within AO356_26945 at 6134.917 kb on - strand, within AO356_26945 at 6134.917 kb on - strand, within AO356_26945 at 6134.917 kb on - strand, within AO356_26945 at 6134.917 kb on - strand, within AO356_26945 at 6134.919 kb on - strand, within AO356_26945 at 6135.075 kb on + strand, within AO356_26945 at 6135.076 kb on - strand, within AO356_26945 at 6135.110 kb on - strand, within AO356_26945 at 6135.153 kb on + strand at 6135.168 kb on + strand at 6135.189 kb on + strand at 6135.287 kb on - strand at 6135.360 kb on - strand at 6135.360 kb on - strand at 6135.402 kb on + strand at 6135.402 kb on + strand at 6135.605 kb on + strand at 6135.799 kb on + strand, within AO356_26950 at 6135.799 kb on + strand, within AO356_26950 at 6135.800 kb on - strand, within AO356_26950 at 6136.160 kb on + strand, within AO356_26950 at 6136.160 kb on + strand, within AO356_26950 at 6136.160 kb on + strand, within AO356_26950 at 6136.161 kb on - strand, within AO356_26950 at 6136.161 kb on - strand, within AO356_26950 at 6136.602 kb on + strand, within AO356_26950 at 6136.763 kb on + strand, within AO356_26950 at 6136.763 kb on + strand, within AO356_26950 at 6136.763 kb on + strand, within AO356_26950 at 6136.763 kb on + strand, within AO356_26950 at 6136.764 kb on - strand, within AO356_26950 at 6136.764 kb on - strand, within AO356_26950 at 6136.764 kb on - strand, within AO356_26950 at 6136.822 kb on + strand, within AO356_26950 at 6136.956 kb on - strand, within AO356_26950 at 6136.973 kb on + strand, within AO356_26950 at 6136.973 kb on + strand, within AO356_26950 at 6136.973 kb on + strand, within AO356_26950 at 6136.974 kb on - strand, within AO356_26950 at 6136.974 kb on - strand, within AO356_26950 at 6137.219 kb on + strand, within AO356_26950 at 6137.822 kb on + strand at 6137.823 kb on - strand at 6138.474 kb on + strand, within AO356_26955 at 6138.474 kb on + strand, within AO356_26955 at 6138.475 kb on - strand, within AO356_26955 at 6138.475 kb on - strand, within AO356_26955 at 6138.632 kb on - strand, within AO356_26955 at 6138.787 kb on + strand, within AO356_26955 at 6138.788 kb on - strand, within AO356_26955 at 6138.929 kb on - strand, within AO356_26955
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,134,501 - +0.1 6,134,501 - +0.7 6,134,667 + AO356_26945 0.14 -0.6 6,134,809 - AO356_26945 0.37 +0.1 6,134,916 + AO356_26945 0.55 -0.5 6,134,916 + AO356_26945 0.55 +0.1 6,134,917 - AO356_26945 0.55 -1.6 6,134,917 - AO356_26945 0.55 -3.0 6,134,917 - AO356_26945 0.55 +0.1 6,134,917 - AO356_26945 0.55 +0.1 6,134,917 - AO356_26945 0.55 -0.2 6,134,919 - AO356_26945 0.55 +0.8 6,135,075 + AO356_26945 0.81 -0.9 6,135,076 - AO356_26945 0.81 +1.6 6,135,110 - AO356_26945 0.87 +1.2 6,135,153 + +0.4 6,135,168 + +0.3 6,135,189 + -0.6 6,135,287 - +0.1 6,135,360 - +0.8 6,135,360 - +0.1 6,135,402 + +0.1 6,135,402 + -0.6 6,135,605 + +0.8 6,135,799 + AO356_26950 0.17 +0.4 6,135,799 + AO356_26950 0.17 -0.5 6,135,800 - AO356_26950 0.17 +0.4 6,136,160 + AO356_26950 0.31 -1.2 6,136,160 + AO356_26950 0.31 +0.5 6,136,160 + AO356_26950 0.31 -0.3 6,136,161 - AO356_26950 0.31 +0.1 6,136,161 - AO356_26950 0.31 +1.5 6,136,602 + AO356_26950 0.48 -0.9 6,136,763 + AO356_26950 0.54 -0.6 6,136,763 + AO356_26950 0.54 +0.3 6,136,763 + AO356_26950 0.54 -0.2 6,136,763 + AO356_26950 0.54 -2.7 6,136,764 - AO356_26950 0.54 -0.8 6,136,764 - AO356_26950 0.54 +0.4 6,136,764 - AO356_26950 0.54 -0.3 6,136,822 + AO356_26950 0.56 +0.3 6,136,956 - AO356_26950 0.61 -0.7 6,136,973 + AO356_26950 0.62 +1.2 6,136,973 + AO356_26950 0.62 +1.7 6,136,973 + AO356_26950 0.62 -0.1 6,136,974 - AO356_26950 0.62 +1.4 6,136,974 - AO356_26950 0.62 +0.6 6,137,219 + AO356_26950 0.71 -0.2 6,137,822 + -1.2 6,137,823 - -0.2 6,138,474 + AO356_26955 0.44 -0.7 6,138,474 + AO356_26955 0.44 +1.1 6,138,475 - AO356_26955 0.44 +1.7 6,138,475 - AO356_26955 0.44 -0.1 6,138,632 - AO356_26955 0.57 +0.6 6,138,787 + AO356_26955 0.70 +1.8 6,138,788 - AO356_26955 0.71 -0.3 6,138,929 - AO356_26955 0.83 -0.3
Or see this region's nucleotide sequence