Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26125 and AO356_26130 are separated by 69 nucleotides AO356_26130 and AO356_26135 are separated by 236 nucleotides AO356_26135 and AO356_26140 are separated by 53 nucleotides AO356_26140 and AO356_26145 are separated by 107 nucleotides
AO356_26125: AO356_26125 - ABC transporter substrate-binding protein, at 5,914,079 to 5,914,861
_26125
AO356_26130: AO356_26130 - hypothetical protein, at 5,914,931 to 5,915,356
_26130
AO356_26135: AO356_26135 - AraC family transcriptional regulator, at 5,915,593 to 5,916,429
_26135
AO356_26140: AO356_26140 - lysine transporter LysE, at 5,916,483 to 5,917,085
_26140
AO356_26145: AO356_26145 - aldehyde dehydrogenase, at 5,917,193 to 5,918,626
_26145
Position (kb) 5915
5916
5917 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5914.715 kb on + strand, within AO356_26125 at 5914.715 kb on + strand, within AO356_26125 at 5914.715 kb on + strand, within AO356_26125 at 5914.716 kb on - strand, within AO356_26125 at 5914.743 kb on + strand, within AO356_26125 at 5914.811 kb on + strand at 5914.812 kb on - strand at 5914.812 kb on - strand at 5914.812 kb on - strand at 5914.832 kb on + strand at 5914.832 kb on + strand at 5914.833 kb on - strand at 5914.847 kb on - strand at 5914.851 kb on - strand at 5914.851 kb on - strand at 5914.947 kb on + strand at 5915.213 kb on - strand, within AO356_26130 at 5915.453 kb on - strand at 5915.470 kb on + strand at 5915.471 kb on - strand at 5915.474 kb on + strand at 5915.475 kb on - strand at 5915.475 kb on - strand at 5915.475 kb on - strand at 5915.677 kb on + strand, within AO356_26135 at 5915.677 kb on + strand, within AO356_26135 at 5915.678 kb on - strand, within AO356_26135 at 5915.678 kb on - strand, within AO356_26135 at 5915.678 kb on - strand, within AO356_26135 at 5915.854 kb on + strand, within AO356_26135 at 5915.854 kb on + strand, within AO356_26135 at 5915.855 kb on - strand, within AO356_26135 at 5916.036 kb on + strand, within AO356_26135 at 5916.131 kb on - strand, within AO356_26135 at 5916.250 kb on + strand, within AO356_26135 at 5916.251 kb on - strand, within AO356_26135 at 5916.251 kb on - strand, within AO356_26135 at 5916.251 kb on - strand, within AO356_26135 at 5916.251 kb on - strand, within AO356_26135 at 5916.494 kb on - strand at 5916.494 kb on - strand at 5916.531 kb on - strand at 5916.549 kb on - strand, within AO356_26140 at 5916.549 kb on - strand, within AO356_26140 at 5916.566 kb on + strand, within AO356_26140 at 5916.566 kb on + strand, within AO356_26140 at 5916.567 kb on - strand, within AO356_26140 at 5916.972 kb on + strand, within AO356_26140 at 5916.972 kb on + strand, within AO356_26140 at 5917.091 kb on - strand at 5917.206 kb on + strand at 5917.227 kb on + strand at 5917.227 kb on + strand at 5917.228 kb on - strand at 5917.228 kb on - strand at 5917.228 kb on - strand at 5917.228 kb on - strand at 5917.273 kb on + strand at 5917.274 kb on - strand at 5917.387 kb on - strand, within AO356_26145 at 5917.387 kb on - strand, within AO356_26145 at 5917.387 kb on - strand, within AO356_26145
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,914,715 + AO356_26125 0.81 +1.3 5,914,715 + AO356_26125 0.81 -0.4 5,914,715 + AO356_26125 0.81 +1.5 5,914,716 - AO356_26125 0.81 -0.4 5,914,743 + AO356_26125 0.85 -0.3 5,914,811 + -0.7 5,914,812 - -1.2 5,914,812 - +0.4 5,914,812 - +1.5 5,914,832 + +0.5 5,914,832 + -1.9 5,914,833 - -1.2 5,914,847 - +2.1 5,914,851 - +0.1 5,914,851 - +1.5 5,914,947 + -0.6 5,915,213 - AO356_26130 0.66 +0.9 5,915,453 - +1.4 5,915,470 + +0.1 5,915,471 - -0.9 5,915,474 + -0.4 5,915,475 - -0.6 5,915,475 - -0.5 5,915,475 - -1.2 5,915,677 + AO356_26135 0.10 -1.3 5,915,677 + AO356_26135 0.10 +0.8 5,915,678 - AO356_26135 0.10 +0.1 5,915,678 - AO356_26135 0.10 -0.3 5,915,678 - AO356_26135 0.10 -0.1 5,915,854 + AO356_26135 0.31 -0.9 5,915,854 + AO356_26135 0.31 +0.3 5,915,855 - AO356_26135 0.31 -1.1 5,916,036 + AO356_26135 0.53 -1.4 5,916,131 - AO356_26135 0.64 -0.1 5,916,250 + AO356_26135 0.78 +0.4 5,916,251 - AO356_26135 0.79 -0.5 5,916,251 - AO356_26135 0.79 +1.1 5,916,251 - AO356_26135 0.79 -1.3 5,916,251 - AO356_26135 0.79 +0.5 5,916,494 - +0.1 5,916,494 - +0.8 5,916,531 - -1.5 5,916,549 - AO356_26140 0.11 +0.5 5,916,549 - AO356_26140 0.11 -1.5 5,916,566 + AO356_26140 0.14 +0.4 5,916,566 + AO356_26140 0.14 -0.5 5,916,567 - AO356_26140 0.14 -1.0 5,916,972 + AO356_26140 0.81 -0.3 5,916,972 + AO356_26140 0.81 +1.1 5,917,091 - -0.1 5,917,206 + +0.3 5,917,227 + +1.1 5,917,227 + -1.6 5,917,228 - +1.1 5,917,228 - -1.6 5,917,228 - +1.0 5,917,228 - +0.1 5,917,273 + -0.2 5,917,274 - +0.8 5,917,387 - AO356_26145 0.14 -0.1 5,917,387 - AO356_26145 0.14 +0.3 5,917,387 - AO356_26145 0.14 +0.7
Or see this region's nucleotide sequence