Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25425 and AO356_25430 are separated by 5 nucleotides AO356_25430 and AO356_25435 are separated by 102 nucleotides AO356_25435 and AO356_25440 overlap by 4 nucleotides
AO356_25425: AO356_25425 - AraC family transcriptional regulator, at 5,750,109 to 5,750,927
_25425
AO356_25430: AO356_25430 - phosphatidylethanolamine-binding protein, at 5,750,933 to 5,751,472
_25430
AO356_25435: AO356_25435 - nodulation protein NolW, at 5,751,575 to 5,752,234
_25435
AO356_25440: AO356_25440 - histidine kinase, at 5,752,231 to 5,753,682
_25440
Position (kb) 5751
5752
5753 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5750.580 kb on + strand, within AO356_25425 at 5750.580 kb on + strand, within AO356_25425 at 5750.580 kb on + strand, within AO356_25425 at 5750.580 kb on + strand, within AO356_25425 at 5750.580 kb on + strand, within AO356_25425 at 5750.581 kb on - strand, within AO356_25425 at 5750.625 kb on - strand, within AO356_25425 at 5750.625 kb on - strand, within AO356_25425 at 5750.642 kb on + strand, within AO356_25425 at 5750.683 kb on + strand, within AO356_25425 at 5750.683 kb on + strand, within AO356_25425 at 5750.683 kb on + strand, within AO356_25425 at 5750.684 kb on - strand, within AO356_25425 at 5750.871 kb on + strand at 5750.872 kb on - strand at 5750.907 kb on + strand at 5750.907 kb on + strand at 5750.907 kb on + strand at 5750.907 kb on + strand at 5750.908 kb on - strand at 5750.908 kb on - strand at 5750.992 kb on - strand, within AO356_25430 at 5751.035 kb on - strand, within AO356_25430 at 5751.140 kb on + strand, within AO356_25430 at 5751.140 kb on + strand, within AO356_25430 at 5751.141 kb on - strand, within AO356_25430 at 5751.141 kb on - strand, within AO356_25430 at 5751.184 kb on + strand, within AO356_25430 at 5751.185 kb on - strand, within AO356_25430 at 5751.185 kb on - strand, within AO356_25430 at 5751.185 kb on - strand, within AO356_25430 at 5751.190 kb on + strand, within AO356_25430 at 5751.205 kb on + strand, within AO356_25430 at 5751.205 kb on + strand, within AO356_25430 at 5751.255 kb on + strand, within AO356_25430 at 5751.271 kb on - strand, within AO356_25430 at 5751.271 kb on - strand, within AO356_25430 at 5751.278 kb on - strand, within AO356_25430 at 5751.418 kb on - strand, within AO356_25430 at 5751.432 kb on - strand at 5751.510 kb on + strand at 5751.797 kb on + strand, within AO356_25435 at 5751.797 kb on + strand, within AO356_25435 at 5751.798 kb on - strand, within AO356_25435 at 5752.031 kb on + strand, within AO356_25435 at 5752.032 kb on - strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.181 kb on - strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.183 kb on - strand at 5752.495 kb on + strand, within AO356_25440 at 5752.516 kb on + strand, within AO356_25440 at 5752.517 kb on - strand, within AO356_25440 at 5752.642 kb on - strand, within AO356_25440 at 5753.067 kb on + strand, within AO356_25440 at 5753.068 kb on - strand, within AO356_25440
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,750,580 + AO356_25425 0.58 +0.7 5,750,580 + AO356_25425 0.58 +1.2 5,750,580 + AO356_25425 0.58 -1.1 5,750,580 + AO356_25425 0.58 +0.0 5,750,580 + AO356_25425 0.58 +0.3 5,750,581 - AO356_25425 0.58 +1.2 5,750,625 - AO356_25425 0.63 -0.5 5,750,625 - AO356_25425 0.63 +0.8 5,750,642 + AO356_25425 0.65 +0.9 5,750,683 + AO356_25425 0.70 -0.2 5,750,683 + AO356_25425 0.70 +0.2 5,750,683 + AO356_25425 0.70 +0.2 5,750,684 - AO356_25425 0.70 +0.8 5,750,871 + +0.5 5,750,872 - -0.7 5,750,907 + -0.6 5,750,907 + -0.5 5,750,907 + -0.1 5,750,907 + -0.1 5,750,908 - -0.7 5,750,908 - -0.4 5,750,992 - AO356_25430 0.11 +0.5 5,751,035 - AO356_25430 0.19 -1.3 5,751,140 + AO356_25430 0.38 -0.3 5,751,140 + AO356_25430 0.38 -0.2 5,751,141 - AO356_25430 0.39 +0.5 5,751,141 - AO356_25430 0.39 +0.2 5,751,184 + AO356_25430 0.46 +0.5 5,751,185 - AO356_25430 0.47 -0.3 5,751,185 - AO356_25430 0.47 -0.2 5,751,185 - AO356_25430 0.47 -0.4 5,751,190 + AO356_25430 0.48 +0.7 5,751,205 + AO356_25430 0.50 -0.4 5,751,205 + AO356_25430 0.50 +1.0 5,751,255 + AO356_25430 0.60 -0.5 5,751,271 - AO356_25430 0.63 -0.4 5,751,271 - AO356_25430 0.63 +0.9 5,751,278 - AO356_25430 0.64 +1.0 5,751,418 - AO356_25430 0.90 +0.3 5,751,432 - -0.1 5,751,510 + -0.4 5,751,797 + AO356_25435 0.34 -1.8 5,751,797 + AO356_25435 0.34 +0.6 5,751,798 - AO356_25435 0.34 +0.7 5,752,031 + AO356_25435 0.69 -2.0 5,752,032 - AO356_25435 0.69 -1.0 5,752,077 + AO356_25435 0.76 +0.0 5,752,077 + AO356_25435 0.76 +0.7 5,752,077 + AO356_25435 0.76 +2.0 5,752,181 - +0.4 5,752,182 + +0.5 5,752,182 + -0.8 5,752,182 + -0.6 5,752,182 + -0.4 5,752,183 - +0.7 5,752,495 + AO356_25440 0.18 -0.1 5,752,516 + AO356_25440 0.20 +0.8 5,752,517 - AO356_25440 0.20 +0.4 5,752,642 - AO356_25440 0.28 -0.5 5,753,067 + AO356_25440 0.58 +0.4 5,753,068 - AO356_25440 0.58 -0.1
Or see this region's nucleotide sequence