Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23990 and AO356_23995 are separated by 55 nucleotides AO356_23995 and AO356_24000 overlap by 4 nucleotides AO356_24000 and AO356_24005 overlap by 4 nucleotides
AO356_23990: AO356_23990 - amino acid ABC transporter, at 5,378,861 to 5,379,703
_23990
AO356_23995: AO356_23995 - amino acid ABC transporter, at 5,379,759 to 5,380,610
_23995
AO356_24000: AO356_24000 - hydroxyacid dehydrogenase, at 5,380,607 to 5,382,031
_24000
AO356_24005: AO356_24005 - aspartate aminotransferase, at 5,382,028 to 5,383,239
_24005
Position (kb) 5380
5381
5382
5383 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5379.930 kb on - strand, within AO356_23995 at 5379.952 kb on - strand, within AO356_23995 at 5380.113 kb on + strand, within AO356_23995 at 5380.129 kb on - strand, within AO356_23995 at 5380.254 kb on + strand, within AO356_23995 at 5380.254 kb on + strand, within AO356_23995 at 5380.576 kb on - strand at 5380.576 kb on - strand at 5380.576 kb on - strand at 5380.710 kb on - strand at 5380.830 kb on + strand, within AO356_24000 at 5380.830 kb on + strand, within AO356_24000 at 5380.831 kb on - strand, within AO356_24000 at 5381.651 kb on - strand, within AO356_24000 at 5381.651 kb on - strand, within AO356_24000 at 5381.735 kb on + strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.772 kb on - strand, within AO356_24000 at 5381.772 kb on - strand, within AO356_24000 at 5381.822 kb on + strand, within AO356_24000 at 5382.037 kb on + strand at 5382.037 kb on + strand at 5382.038 kb on - strand at 5382.571 kb on + strand, within AO356_24005 at 5382.657 kb on + strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.751 kb on + strand, within AO356_24005 at 5382.751 kb on + strand, within AO356_24005 at 5382.923 kb on - strand, within AO356_24005
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,379,930 - AO356_23995 0.20 -0.8 5,379,952 - AO356_23995 0.23 +0.6 5,380,113 + AO356_23995 0.42 -2.9 5,380,129 - AO356_23995 0.43 +0.5 5,380,254 + AO356_23995 0.58 +0.1 5,380,254 + AO356_23995 0.58 -0.3 5,380,576 - -0.3 5,380,576 - +0.9 5,380,576 - -0.8 5,380,710 - -1.2 5,380,830 + AO356_24000 0.16 -0.8 5,380,830 + AO356_24000 0.16 +0.6 5,380,831 - AO356_24000 0.16 -0.2 5,381,651 - AO356_24000 0.73 -1.2 5,381,651 - AO356_24000 0.73 +0.7 5,381,735 + AO356_24000 0.79 -1.0 5,381,736 - AO356_24000 0.79 +0.0 5,381,736 - AO356_24000 0.79 +0.6 5,381,736 - AO356_24000 0.79 -1.9 5,381,771 + AO356_24000 0.82 +0.2 5,381,771 + AO356_24000 0.82 -1.2 5,381,771 + AO356_24000 0.82 +0.2 5,381,772 - AO356_24000 0.82 -0.8 5,381,772 - AO356_24000 0.82 -0.1 5,381,822 + AO356_24000 0.85 +1.2 5,382,037 + +1.1 5,382,037 + +0.1 5,382,038 - -0.3 5,382,571 + AO356_24005 0.45 +0.2 5,382,657 + AO356_24005 0.52 -0.3 5,382,658 - AO356_24005 0.52 +0.1 5,382,658 - AO356_24005 0.52 +1.6 5,382,658 - AO356_24005 0.52 +1.2 5,382,751 + AO356_24005 0.60 +1.6 5,382,751 + AO356_24005 0.60 +1.5 5,382,923 - AO356_24005 0.74 +0.3
Or see this region's nucleotide sequence