Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22425 and AO356_22430 are separated by 348 nucleotides AO356_22430 and AO356_22435 are separated by 205 nucleotides AO356_22435 and AO356_22440 are separated by 106 nucleotides
AO356_22425: AO356_22425 - TonB-dependent receptor, at 5,011,430 to 5,013,598
_22425
AO356_22430: AO356_22430 - hypothetical protein, at 5,013,947 to 5,014,621
_22430
AO356_22435: AO356_22435 - decarboxylase, at 5,014,827 to 5,015,201
_22435
AO356_22440: AO356_22440 - LysR family transcriptional regulator, at 5,015,308 to 5,016,240
_22440
Position (kb)
5013
5014
5015 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5013.163 kb on - strand, within AO356_22425 at 5013.163 kb on - strand, within AO356_22425 at 5013.183 kb on + strand, within AO356_22425 at 5013.183 kb on + strand, within AO356_22425 at 5013.184 kb on - strand, within AO356_22425 at 5013.184 kb on - strand, within AO356_22425 at 5013.184 kb on - strand, within AO356_22425 at 5013.184 kb on - strand, within AO356_22425 at 5013.184 kb on - strand, within AO356_22425 at 5013.219 kb on + strand, within AO356_22425 at 5013.220 kb on - strand, within AO356_22425 at 5013.325 kb on + strand, within AO356_22425 at 5013.402 kb on + strand at 5013.403 kb on - strand at 5013.403 kb on - strand at 5013.424 kb on + strand at 5013.425 kb on - strand at 5013.535 kb on + strand at 5013.535 kb on + strand at 5013.536 kb on - strand at 5013.670 kb on - strand at 5013.760 kb on + strand at 5013.946 kb on + strand at 5014.052 kb on + strand, within AO356_22430 at 5014.187 kb on - strand, within AO356_22430 at 5014.360 kb on + strand, within AO356_22430 at 5014.367 kb on - strand, within AO356_22430 at 5014.369 kb on + strand, within AO356_22430 at 5014.419 kb on + strand, within AO356_22430 at 5014.658 kb on - strand at 5014.658 kb on - strand at 5014.726 kb on + strand at 5014.734 kb on + strand at 5014.735 kb on - strand at 5014.735 kb on - strand at 5014.769 kb on + strand at 5014.777 kb on + strand at 5014.778 kb on - strand at 5014.803 kb on + strand at 5014.804 kb on - strand at 5014.828 kb on + strand at 5014.828 kb on + strand at 5014.829 kb on - strand at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.046 kb on + strand, within AO356_22435 at 5015.047 kb on - strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.151 kb on + strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.152 kb on - strand, within AO356_22435 at 5015.156 kb on - strand, within AO356_22435 at 5015.201 kb on + strand at 5015.209 kb on - strand at 5015.239 kb on + strand at 5015.239 kb on + strand at 5015.240 kb on - strand at 5015.240 kb on - strand at 5015.262 kb on + strand at 5015.263 kb on - strand at 5015.271 kb on + strand at 5015.271 kb on + strand at 5015.272 kb on - strand at 5015.274 kb on + strand at 5015.295 kb on - strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.336 kb on + strand at 5015.337 kb on - strand at 5015.337 kb on - strand at 5015.344 kb on - strand at 5015.487 kb on - strand, within AO356_22440
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,013,163 - AO356_22425 0.80 -0.0 5,013,163 - AO356_22425 0.80 +0.4 5,013,183 + AO356_22425 0.81 +1.6 5,013,183 + AO356_22425 0.81 +0.6 5,013,184 - AO356_22425 0.81 -0.3 5,013,184 - AO356_22425 0.81 -1.1 5,013,184 - AO356_22425 0.81 +0.8 5,013,184 - AO356_22425 0.81 -1.0 5,013,184 - AO356_22425 0.81 -1.3 5,013,219 + AO356_22425 0.82 +1.1 5,013,220 - AO356_22425 0.83 +1.0 5,013,325 + AO356_22425 0.87 -0.1 5,013,402 + +0.7 5,013,403 - +0.5 5,013,403 - +0.3 5,013,424 + +1.5 5,013,425 - +0.1 5,013,535 + -0.6 5,013,535 + -0.7 5,013,536 - +1.1 5,013,670 - +0.5 5,013,760 + -1.0 5,013,946 + -0.2 5,014,052 + AO356_22430 0.16 -0.1 5,014,187 - AO356_22430 0.36 -0.3 5,014,360 + AO356_22430 0.61 -0.0 5,014,367 - AO356_22430 0.62 -0.6 5,014,369 + AO356_22430 0.63 -0.4 5,014,419 + AO356_22430 0.70 -1.0 5,014,658 - +0.1 5,014,658 - -0.2 5,014,726 + +0.5 5,014,734 + +0.5 5,014,735 - +1.3 5,014,735 - +1.5 5,014,769 + +0.9 5,014,777 + +0.5 5,014,778 - +1.6 5,014,803 + +0.8 5,014,804 - +0.9 5,014,828 + +0.7 5,014,828 + +1.3 5,014,829 - -1.3 5,015,046 + AO356_22435 0.58 -0.4 5,015,046 + AO356_22435 0.58 -0.1 5,015,046 + AO356_22435 0.58 -0.0 5,015,046 + AO356_22435 0.58 +1.9 5,015,047 - AO356_22435 0.59 -0.3 5,015,151 + AO356_22435 0.86 +0.8 5,015,151 + AO356_22435 0.86 -0.8 5,015,151 + AO356_22435 0.86 +0.1 5,015,151 + AO356_22435 0.86 +0.5 5,015,152 - AO356_22435 0.87 -1.1 5,015,152 - AO356_22435 0.87 +1.3 5,015,152 - AO356_22435 0.87 -0.9 5,015,152 - AO356_22435 0.87 +1.6 5,015,156 - AO356_22435 0.88 -0.3 5,015,201 + -1.8 5,015,209 - +0.3 5,015,239 + -0.5 5,015,239 + +0.5 5,015,240 - -1.0 5,015,240 - +0.1 5,015,262 + -1.3 5,015,263 - -1.2 5,015,271 + -0.9 5,015,271 + -0.0 5,015,272 - -0.5 5,015,274 + +1.1 5,015,295 - +2.6 5,015,336 + -2.0 5,015,336 + +0.5 5,015,336 + +0.9 5,015,336 + +0.6 5,015,336 + +0.1 5,015,336 + +0.5 5,015,337 - -0.2 5,015,337 - -0.7 5,015,344 - -2.0 5,015,487 - AO356_22440 0.19 +1.3
Or see this region's nucleotide sequence