Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20645 and AO356_20650 are separated by 141 nucleotides AO356_20650 and AO356_20655 are separated by 21 nucleotides
AO356_20645: AO356_20645 - ketosteroid isomerase, at 4,607,560 to 4,608,042
_20645
AO356_20650: AO356_20650 - integrase, at 4,608,184 to 4,608,411
_20650
AO356_20655: AO356_20655 - AraC family transcriptional regulator, at 4,608,433 to 4,609,365
_20655
Position (kb)
4607
4608
4609 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4606.656 kb on - strand at 4606.666 kb on + strand at 4606.671 kb on + strand at 4606.690 kb on - strand at 4606.698 kb on + strand at 4606.698 kb on + strand at 4606.698 kb on + strand at 4606.699 kb on - strand at 4606.699 kb on - strand at 4606.699 kb on - strand at 4606.773 kb on - strand at 4606.790 kb on + strand at 4606.791 kb on - strand at 4606.884 kb on + strand at 4606.885 kb on - strand at 4606.886 kb on + strand at 4606.886 kb on + strand at 4606.887 kb on - strand at 4606.887 kb on - strand at 4606.887 kb on - strand at 4607.051 kb on - strand at 4607.132 kb on + strand at 4607.132 kb on + strand at 4607.132 kb on + strand at 4607.133 kb on - strand at 4607.146 kb on - strand at 4607.146 kb on - strand at 4607.161 kb on + strand at 4607.161 kb on + strand at 4607.209 kb on + strand at 4607.209 kb on + strand at 4607.209 kb on + strand at 4607.209 kb on + strand at 4607.209 kb on + strand at 4607.209 kb on + strand at 4607.210 kb on - strand at 4607.210 kb on - strand at 4607.210 kb on - strand at 4607.210 kb on - strand at 4607.210 kb on - strand at 4607.371 kb on + strand at 4607.371 kb on + strand at 4607.383 kb on + strand at 4607.383 kb on + strand at 4607.383 kb on + strand at 4607.383 kb on + strand at 4607.384 kb on - strand at 4607.384 kb on - strand at 4607.440 kb on + strand at 4607.440 kb on + strand at 4607.440 kb on + strand at 4607.440 kb on + strand at 4607.441 kb on - strand at 4607.464 kb on + strand at 4607.465 kb on - strand at 4607.520 kb on - strand at 4607.680 kb on - strand, within AO356_20645 at 4607.770 kb on + strand, within AO356_20645 at 4607.770 kb on + strand, within AO356_20645 at 4607.770 kb on + strand, within AO356_20645 at 4607.770 kb on + strand, within AO356_20645 at 4607.770 kb on + strand, within AO356_20645 at 4607.771 kb on - strand, within AO356_20645 at 4607.772 kb on + strand, within AO356_20645 at 4607.773 kb on - strand, within AO356_20645 at 4607.773 kb on - strand, within AO356_20645 at 4607.773 kb on - strand, within AO356_20645 at 4607.773 kb on - strand, within AO356_20645 at 4607.923 kb on + strand, within AO356_20645 at 4607.924 kb on - strand, within AO356_20645 at 4607.924 kb on - strand, within AO356_20645 at 4607.935 kb on + strand, within AO356_20645 at 4607.935 kb on + strand, within AO356_20645 at 4607.935 kb on + strand, within AO356_20645 at 4607.935 kb on + strand, within AO356_20645 at 4607.936 kb on - strand, within AO356_20645 at 4607.936 kb on - strand, within AO356_20645 at 4607.936 kb on - strand, within AO356_20645 at 4607.998 kb on + strand at 4607.998 kb on + strand at 4607.998 kb on + strand at 4607.998 kb on + strand at 4607.998 kb on + strand at 4607.998 kb on + strand at 4607.999 kb on - strand at 4607.999 kb on - strand at 4607.999 kb on - strand at 4607.999 kb on - strand at 4608.041 kb on - strand at 4608.052 kb on + strand at 4608.052 kb on + strand at 4608.053 kb on - strand at 4608.235 kb on + strand, within AO356_20650 at 4608.236 kb on - strand, within AO356_20650 at 4608.236 kb on - strand, within AO356_20650 at 4608.236 kb on - strand, within AO356_20650 at 4608.416 kb on + strand at 4608.434 kb on + strand at 4608.434 kb on + strand at 4608.434 kb on + strand at 4608.434 kb on + strand at 4608.434 kb on + strand at 4608.435 kb on - strand at 4608.435 kb on - strand at 4608.435 kb on - strand at 4608.435 kb on - strand at 4608.438 kb on + strand at 4608.438 kb on + strand at 4608.438 kb on + strand at 4608.438 kb on + strand at 4608.438 kb on + strand at 4608.439 kb on - strand at 4608.439 kb on - strand at 4608.439 kb on - strand at 4608.439 kb on - strand at 4608.439 kb on - strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.508 kb on + strand at 4608.509 kb on - strand at 4608.509 kb on - strand at 4608.509 kb on - strand at 4608.509 kb on - strand at 4608.599 kb on + strand, within AO356_20655 at 4608.600 kb on - strand, within AO356_20655 at 4608.600 kb on - strand, within AO356_20655 at 4608.683 kb on + strand, within AO356_20655 at 4608.683 kb on + strand, within AO356_20655 at 4608.684 kb on - strand, within AO356_20655 at 4608.684 kb on - strand, within AO356_20655 at 4608.699 kb on - strand, within AO356_20655 at 4608.758 kb on + strand, within AO356_20655 at 4608.759 kb on - strand, within AO356_20655 at 4608.839 kb on + strand, within AO356_20655 at 4608.839 kb on + strand, within AO356_20655 at 4608.840 kb on - strand, within AO356_20655 at 4608.840 kb on - strand, within AO356_20655 at 4608.840 kb on - strand, within AO356_20655 at 4608.840 kb on - strand, within AO356_20655 at 4608.872 kb on - strand, within AO356_20655 at 4608.949 kb on + strand, within AO356_20655 at 4608.949 kb on + strand, within AO356_20655 at 4608.949 kb on + strand, within AO356_20655 at 4608.949 kb on + strand, within AO356_20655 at 4608.950 kb on - strand, within AO356_20655
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,606,656 - +1.0 4,606,666 + +1.1 4,606,671 + +0.9 4,606,690 - -0.6 4,606,698 + +2.7 4,606,698 + -1.8 4,606,698 + -0.4 4,606,699 - -1.1 4,606,699 - -1.2 4,606,699 - -0.1 4,606,773 - -0.2 4,606,790 + +0.4 4,606,791 - -0.8 4,606,884 + +0.2 4,606,885 - +1.0 4,606,886 + +0.1 4,606,886 + -0.5 4,606,887 - +0.4 4,606,887 - +1.1 4,606,887 - -0.7 4,607,051 - +0.1 4,607,132 + +1.2 4,607,132 + +1.0 4,607,132 + -1.0 4,607,133 - -0.0 4,607,146 - -0.1 4,607,146 - -0.3 4,607,161 + +0.3 4,607,161 + -0.6 4,607,209 + +0.1 4,607,209 + +0.7 4,607,209 + +1.1 4,607,209 + -2.4 4,607,209 + -2.2 4,607,209 + +2.7 4,607,210 - +0.7 4,607,210 - +0.3 4,607,210 - -1.2 4,607,210 - +0.6 4,607,210 - -0.1 4,607,371 + +1.4 4,607,371 + +0.5 4,607,383 + -0.1 4,607,383 + +0.9 4,607,383 + +0.1 4,607,383 + +0.4 4,607,384 - +0.7 4,607,384 - -1.2 4,607,440 + -1.3 4,607,440 + +0.8 4,607,440 + -0.0 4,607,440 + +0.4 4,607,441 - -0.2 4,607,464 + +0.6 4,607,465 - +0.8 4,607,520 - -1.4 4,607,680 - AO356_20645 0.25 +0.6 4,607,770 + AO356_20645 0.43 +0.3 4,607,770 + AO356_20645 0.43 +0.4 4,607,770 + AO356_20645 0.43 -0.4 4,607,770 + AO356_20645 0.43 +1.0 4,607,770 + AO356_20645 0.43 -0.6 4,607,771 - AO356_20645 0.44 -1.6 4,607,772 + AO356_20645 0.44 -0.0 4,607,773 - AO356_20645 0.44 -1.5 4,607,773 - AO356_20645 0.44 +0.8 4,607,773 - AO356_20645 0.44 +1.0 4,607,773 - AO356_20645 0.44 +0.4 4,607,923 + AO356_20645 0.75 +0.4 4,607,924 - AO356_20645 0.75 +1.1 4,607,924 - AO356_20645 0.75 +0.7 4,607,935 + AO356_20645 0.78 +0.2 4,607,935 + AO356_20645 0.78 +0.3 4,607,935 + AO356_20645 0.78 +0.4 4,607,935 + AO356_20645 0.78 +0.4 4,607,936 - AO356_20645 0.78 +1.4 4,607,936 - AO356_20645 0.78 -0.0 4,607,936 - AO356_20645 0.78 -0.9 4,607,998 + +0.2 4,607,998 + -0.5 4,607,998 + -0.7 4,607,998 + -1.1 4,607,998 + +0.4 4,607,998 + +1.6 4,607,999 - -0.0 4,607,999 - +0.4 4,607,999 - -0.6 4,607,999 - +0.2 4,608,041 - -0.4 4,608,052 + -0.7 4,608,052 + +1.0 4,608,053 - +0.3 4,608,235 + AO356_20650 0.22 -0.5 4,608,236 - AO356_20650 0.23 +0.7 4,608,236 - AO356_20650 0.23 +0.5 4,608,236 - AO356_20650 0.23 +0.4 4,608,416 + +1.6 4,608,434 + +0.2 4,608,434 + -0.5 4,608,434 + -0.0 4,608,434 + +0.9 4,608,434 + -0.7 4,608,435 - -0.1 4,608,435 - +0.4 4,608,435 - +0.4 4,608,435 - -1.2 4,608,438 + -1.1 4,608,438 + +0.6 4,608,438 + -0.0 4,608,438 + +0.3 4,608,438 + -0.4 4,608,439 - -0.3 4,608,439 - +1.2 4,608,439 - +0.7 4,608,439 - +0.4 4,608,439 - -0.3 4,608,508 + -0.8 4,608,508 + +0.4 4,608,508 + -0.6 4,608,508 + -0.9 4,608,508 + +0.0 4,608,508 + +0.8 4,608,508 + +0.9 4,608,509 - +0.2 4,608,509 - +0.8 4,608,509 - +0.4 4,608,509 - +0.4 4,608,599 + AO356_20655 0.18 -0.3 4,608,600 - AO356_20655 0.18 +0.4 4,608,600 - AO356_20655 0.18 -1.6 4,608,683 + AO356_20655 0.27 +0.0 4,608,683 + AO356_20655 0.27 -1.6 4,608,684 - AO356_20655 0.27 +0.8 4,608,684 - AO356_20655 0.27 -0.4 4,608,699 - AO356_20655 0.29 +0.4 4,608,758 + AO356_20655 0.35 -0.2 4,608,759 - AO356_20655 0.35 +0.0 4,608,839 + AO356_20655 0.44 -0.8 4,608,839 + AO356_20655 0.44 +1.4 4,608,840 - AO356_20655 0.44 +0.1 4,608,840 - AO356_20655 0.44 +0.8 4,608,840 - AO356_20655 0.44 -0.2 4,608,840 - AO356_20655 0.44 +0.5 4,608,872 - AO356_20655 0.47 -3.8 4,608,949 + AO356_20655 0.55 +1.0 4,608,949 + AO356_20655 0.55 +0.4 4,608,949 + AO356_20655 0.55 -0.4 4,608,949 + AO356_20655 0.55 +1.3 4,608,950 - AO356_20655 0.55 -1.9
Or see this region's nucleotide sequence