Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19350 and AO356_19355 are separated by 124 nucleotides AO356_19355 and AO356_19360 are separated by 34 nucleotides AO356_19360 and AO356_19365 overlap by 4 nucleotides AO356_19365 and AO356_19370 overlap by 14 nucleotides
AO356_19350: AO356_19350 - hypothetical protein, at 4,344,919 to 4,345,707
_19350
AO356_19355: AO356_19355 - HAD family hydrolase, at 4,345,832 to 4,346,485
_19355
AO356_19360: AO356_19360 - spermidine/putrescine ABC transporter ATP-binding protein, at 4,346,520 to 4,347,509
_19360
AO356_19365: AO356_19365 - ABC transporter permease, at 4,347,506 to 4,348,306
_19365
AO356_19370: AO356_19370 - ABC transporter permease, at 4,348,293 to 4,349,138
_19370
Position (kb)
4346
4347
4348 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4345.522 kb on + strand, within AO356_19350 at 4345.522 kb on + strand, within AO356_19350 at 4345.523 kb on - strand, within AO356_19350 at 4345.705 kb on + strand at 4345.720 kb on + strand at 4345.720 kb on + strand at 4345.720 kb on + strand at 4345.720 kb on + strand at 4345.721 kb on - strand at 4345.772 kb on + strand at 4345.843 kb on + strand at 4345.843 kb on + strand at 4345.843 kb on + strand at 4345.956 kb on + strand, within AO356_19355 at 4345.956 kb on + strand, within AO356_19355 at 4346.031 kb on + strand, within AO356_19355 at 4346.032 kb on - strand, within AO356_19355 at 4346.062 kb on - strand, within AO356_19355 at 4346.316 kb on + strand, within AO356_19355 at 4346.316 kb on + strand, within AO356_19355 at 4346.316 kb on + strand, within AO356_19355 at 4346.317 kb on - strand, within AO356_19355 at 4346.317 kb on - strand, within AO356_19355 at 4346.317 kb on - strand, within AO356_19355 at 4346.317 kb on - strand, within AO356_19355 at 4346.346 kb on + strand, within AO356_19355 at 4346.346 kb on + strand, within AO356_19355 at 4346.800 kb on + strand, within AO356_19360 at 4346.800 kb on + strand, within AO356_19360 at 4346.800 kb on + strand, within AO356_19360 at 4346.800 kb on + strand, within AO356_19360 at 4346.800 kb on + strand, within AO356_19360 at 4346.801 kb on - strand, within AO356_19360 at 4346.845 kb on + strand, within AO356_19360 at 4346.845 kb on + strand, within AO356_19360 at 4346.845 kb on + strand, within AO356_19360 at 4346.846 kb on - strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.871 kb on + strand, within AO356_19360 at 4346.872 kb on - strand, within AO356_19360 at 4347.259 kb on + strand, within AO356_19360 at 4347.259 kb on + strand, within AO356_19360 at 4347.259 kb on + strand, within AO356_19360 at 4347.259 kb on + strand, within AO356_19360 at 4347.260 kb on - strand, within AO356_19360 at 4347.472 kb on + strand at 4347.473 kb on - strand at 4347.502 kb on + strand at 4347.503 kb on - strand at 4347.503 kb on - strand at 4347.532 kb on + strand at 4347.557 kb on + strand at 4347.570 kb on + strand at 4347.627 kb on + strand, within AO356_19365 at 4347.628 kb on - strand, within AO356_19365 at 4347.628 kb on - strand, within AO356_19365 at 4347.849 kb on + strand, within AO356_19365 at 4347.850 kb on - strand, within AO356_19365 at 4347.850 kb on - strand, within AO356_19365 at 4347.876 kb on + strand, within AO356_19365 at 4347.877 kb on - strand, within AO356_19365 at 4347.877 kb on - strand, within AO356_19365 at 4347.877 kb on - strand, within AO356_19365 at 4347.877 kb on - strand, within AO356_19365 at 4347.930 kb on + strand, within AO356_19365 at 4347.930 kb on + strand, within AO356_19365 at 4347.931 kb on - strand, within AO356_19365 at 4348.027 kb on - strand, within AO356_19365 at 4348.027 kb on - strand, within AO356_19365 at 4348.146 kb on + strand, within AO356_19365 at 4348.146 kb on + strand, within AO356_19365 at 4348.146 kb on + strand, within AO356_19365 at 4348.146 kb on + strand, within AO356_19365 at 4348.146 kb on + strand, within AO356_19365 at 4348.147 kb on - strand, within AO356_19365 at 4348.147 kb on - strand, within AO356_19365 at 4348.147 kb on - strand, within AO356_19365 at 4348.147 kb on - strand, within AO356_19365 at 4348.206 kb on + strand, within AO356_19365 at 4348.207 kb on - strand, within AO356_19365 at 4348.254 kb on + strand at 4348.254 kb on + strand at 4348.254 kb on + strand at 4348.254 kb on + strand at 4348.255 kb on - strand at 4348.255 kb on - strand at 4348.273 kb on - strand at 4348.309 kb on + strand at 4348.309 kb on + strand at 4348.309 kb on + strand at 4348.309 kb on + strand at 4348.309 kb on + strand at 4348.310 kb on - strand at 4348.310 kb on - strand at 4348.310 kb on - strand at 4348.310 kb on - strand at 4348.310 kb on - strand at 4348.310 kb on - strand at 4348.474 kb on + strand, within AO356_19370 at 4348.475 kb on - strand, within AO356_19370 at 4348.475 kb on - strand, within AO356_19370
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,345,522 + AO356_19350 0.76 +1.7 4,345,522 + AO356_19350 0.76 +0.4 4,345,523 - AO356_19350 0.77 -2.2 4,345,705 + +0.3 4,345,720 + -1.0 4,345,720 + -0.6 4,345,720 + +0.7 4,345,720 + -1.2 4,345,721 - -0.8 4,345,772 + -0.2 4,345,843 + -0.1 4,345,843 + +0.4 4,345,843 + -0.3 4,345,956 + AO356_19355 0.19 +0.4 4,345,956 + AO356_19355 0.19 +0.5 4,346,031 + AO356_19355 0.30 +0.1 4,346,032 - AO356_19355 0.31 -0.4 4,346,062 - AO356_19355 0.35 -1.9 4,346,316 + AO356_19355 0.74 +0.0 4,346,316 + AO356_19355 0.74 +0.4 4,346,316 + AO356_19355 0.74 +0.2 4,346,317 - AO356_19355 0.74 -1.2 4,346,317 - AO356_19355 0.74 +1.8 4,346,317 - AO356_19355 0.74 +1.4 4,346,317 - AO356_19355 0.74 +0.1 4,346,346 + AO356_19355 0.79 -0.2 4,346,346 + AO356_19355 0.79 -0.8 4,346,800 + AO356_19360 0.28 +0.7 4,346,800 + AO356_19360 0.28 -0.4 4,346,800 + AO356_19360 0.28 +1.0 4,346,800 + AO356_19360 0.28 -0.3 4,346,800 + AO356_19360 0.28 -0.1 4,346,801 - AO356_19360 0.28 -0.3 4,346,845 + AO356_19360 0.33 -0.1 4,346,845 + AO356_19360 0.33 +1.2 4,346,845 + AO356_19360 0.33 -0.3 4,346,846 - AO356_19360 0.33 -1.0 4,346,871 + AO356_19360 0.35 +0.4 4,346,871 + AO356_19360 0.35 +0.4 4,346,871 + AO356_19360 0.35 -0.2 4,346,871 + AO356_19360 0.35 +0.5 4,346,871 + AO356_19360 0.35 +0.3 4,346,871 + AO356_19360 0.35 -1.7 4,346,872 - AO356_19360 0.36 -0.7 4,347,259 + AO356_19360 0.75 +0.0 4,347,259 + AO356_19360 0.75 +0.6 4,347,259 + AO356_19360 0.75 +0.4 4,347,259 + AO356_19360 0.75 -0.2 4,347,260 - AO356_19360 0.75 -1.6 4,347,472 + -0.2 4,347,473 - -0.1 4,347,502 + -0.2 4,347,503 - +0.4 4,347,503 - -0.8 4,347,532 + -0.3 4,347,557 + +0.4 4,347,570 + -0.2 4,347,627 + AO356_19365 0.15 +1.2 4,347,628 - AO356_19365 0.15 -0.2 4,347,628 - AO356_19365 0.15 -0.6 4,347,849 + AO356_19365 0.43 +0.4 4,347,850 - AO356_19365 0.43 -0.6 4,347,850 - AO356_19365 0.43 -0.4 4,347,876 + AO356_19365 0.46 -0.3 4,347,877 - AO356_19365 0.46 +0.2 4,347,877 - AO356_19365 0.46 -1.2 4,347,877 - AO356_19365 0.46 +0.3 4,347,877 - AO356_19365 0.46 +0.2 4,347,930 + AO356_19365 0.53 -2.0 4,347,930 + AO356_19365 0.53 -0.3 4,347,931 - AO356_19365 0.53 +0.1 4,348,027 - AO356_19365 0.65 -1.3 4,348,027 - AO356_19365 0.65 +0.1 4,348,146 + AO356_19365 0.80 -1.0 4,348,146 + AO356_19365 0.80 -0.9 4,348,146 + AO356_19365 0.80 +1.0 4,348,146 + AO356_19365 0.80 +0.0 4,348,146 + AO356_19365 0.80 +1.4 4,348,147 - AO356_19365 0.80 -0.2 4,348,147 - AO356_19365 0.80 -0.9 4,348,147 - AO356_19365 0.80 -0.9 4,348,147 - AO356_19365 0.80 -0.0 4,348,206 + AO356_19365 0.87 -0.9 4,348,207 - AO356_19365 0.88 -0.3 4,348,254 + -0.1 4,348,254 + -1.9 4,348,254 + -0.6 4,348,254 + -2.2 4,348,255 - -0.2 4,348,255 - -0.2 4,348,273 - -0.3 4,348,309 + -0.9 4,348,309 + +0.4 4,348,309 + +1.4 4,348,309 + +0.0 4,348,309 + -0.7 4,348,310 - -0.6 4,348,310 - -0.3 4,348,310 - +0.9 4,348,310 - -0.1 4,348,310 - +1.1 4,348,310 - +0.0 4,348,474 + AO356_19370 0.21 +0.2 4,348,475 - AO356_19370 0.22 +0.8 4,348,475 - AO356_19370 0.22 +1.1
Or see this region's nucleotide sequence