Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16905 and AO356_16910 overlap by 4 nucleotides AO356_16910 and AO356_16915 are separated by 129 nucleotides
AO356_16905: AO356_16905 - hypothetical protein, at 3,810,584 to 3,811,543
_16905
AO356_16910: AO356_16910 - RNA polymerase subunit sigma, at 3,811,540 to 3,812,028
_16910
AO356_16915: AO356_16915 - AraC family transcriptional regulator, at 3,812,158 to 3,813,033
_16915
Position (kb)
3811
3812
3813 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3810.630 kb on - strand at 3810.630 kb on - strand at 3810.691 kb on - strand, within AO356_16905 at 3810.797 kb on + strand, within AO356_16905 at 3810.977 kb on + strand, within AO356_16905 at 3810.978 kb on - strand, within AO356_16905 at 3811.025 kb on + strand, within AO356_16905 at 3811.025 kb on + strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.026 kb on - strand, within AO356_16905 at 3811.268 kb on + strand, within AO356_16905 at 3811.269 kb on - strand, within AO356_16905 at 3811.346 kb on + strand, within AO356_16905 at 3811.378 kb on + strand, within AO356_16905 at 3811.379 kb on - strand, within AO356_16905 at 3811.379 kb on - strand, within AO356_16905 at 3811.405 kb on + strand, within AO356_16905 at 3811.405 kb on + strand, within AO356_16905 at 3811.543 kb on + strand at 3811.543 kb on + strand at 3811.543 kb on + strand at 3811.544 kb on - strand at 3811.544 kb on - strand at 3811.544 kb on - strand at 3811.631 kb on + strand, within AO356_16910 at 3811.632 kb on - strand, within AO356_16910 at 3811.632 kb on - strand, within AO356_16910 at 3811.632 kb on - strand, within AO356_16910 at 3811.632 kb on - strand, within AO356_16910 at 3811.790 kb on + strand, within AO356_16910 at 3811.790 kb on + strand, within AO356_16910 at 3811.818 kb on - strand, within AO356_16910 at 3811.831 kb on + strand, within AO356_16910 at 3811.831 kb on + strand, within AO356_16910 at 3811.831 kb on + strand, within AO356_16910 at 3811.831 kb on + strand, within AO356_16910 at 3811.831 kb on + strand, within AO356_16910 at 3811.832 kb on - strand, within AO356_16910 at 3811.851 kb on + strand, within AO356_16910 at 3811.997 kb on + strand at 3811.997 kb on + strand at 3812.061 kb on - strand at 3812.181 kb on - strand at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.326 kb on + strand, within AO356_16915 at 3812.327 kb on - strand, within AO356_16915 at 3812.327 kb on - strand, within AO356_16915 at 3812.327 kb on - strand, within AO356_16915 at 3812.327 kb on - strand, within AO356_16915 at 3812.327 kb on - strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.330 kb on + strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.331 kb on - strand, within AO356_16915 at 3812.382 kb on - strand, within AO356_16915 at 3812.450 kb on + strand, within AO356_16915 at 3812.450 kb on + strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.451 kb on - strand, within AO356_16915 at 3812.732 kb on + strand, within AO356_16915 at 3812.732 kb on + strand, within AO356_16915 at 3812.733 kb on - strand, within AO356_16915 at 3812.733 kb on - strand, within AO356_16915 at 3812.794 kb on + strand, within AO356_16915 at 3812.847 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.867 kb on + strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.868 kb on - strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.880 kb on + strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.881 kb on - strand, within AO356_16915 at 3812.900 kb on + strand, within AO356_16915 at 3812.901 kb on - strand, within AO356_16915 at 3812.901 kb on - strand, within AO356_16915
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,810,630 - +1.4 3,810,630 - -0.9 3,810,691 - AO356_16905 0.11 -1.6 3,810,797 + AO356_16905 0.22 +0.4 3,810,977 + AO356_16905 0.41 +0.5 3,810,978 - AO356_16905 0.41 +0.1 3,811,025 + AO356_16905 0.46 -2.8 3,811,025 + AO356_16905 0.46 -0.5 3,811,026 - AO356_16905 0.46 -0.1 3,811,026 - AO356_16905 0.46 +0.5 3,811,026 - AO356_16905 0.46 +1.2 3,811,026 - AO356_16905 0.46 -0.0 3,811,026 - AO356_16905 0.46 +0.3 3,811,026 - AO356_16905 0.46 +1.0 3,811,268 + AO356_16905 0.71 +0.2 3,811,269 - AO356_16905 0.71 -0.6 3,811,346 + AO356_16905 0.79 +0.5 3,811,378 + AO356_16905 0.83 +1.0 3,811,379 - AO356_16905 0.83 +0.3 3,811,379 - AO356_16905 0.83 +0.8 3,811,405 + AO356_16905 0.86 -0.5 3,811,405 + AO356_16905 0.86 +0.6 3,811,543 + +0.2 3,811,543 + +0.8 3,811,543 + +0.2 3,811,544 - +1.0 3,811,544 - -0.5 3,811,544 - +0.7 3,811,631 + AO356_16910 0.19 -0.1 3,811,632 - AO356_16910 0.19 -0.9 3,811,632 - AO356_16910 0.19 +1.1 3,811,632 - AO356_16910 0.19 -2.5 3,811,632 - AO356_16910 0.19 +0.1 3,811,790 + AO356_16910 0.51 +0.5 3,811,790 + AO356_16910 0.51 -0.2 3,811,818 - AO356_16910 0.57 +0.5 3,811,831 + AO356_16910 0.60 +0.1 3,811,831 + AO356_16910 0.60 -0.9 3,811,831 + AO356_16910 0.60 -0.5 3,811,831 + AO356_16910 0.60 -0.2 3,811,831 + AO356_16910 0.60 +0.5 3,811,832 - AO356_16910 0.60 -0.1 3,811,851 + AO356_16910 0.64 -2.7 3,811,997 + +0.2 3,811,997 + +1.1 3,812,061 - +0.1 3,812,181 - -1.6 3,812,326 + AO356_16915 0.19 +0.5 3,812,326 + AO356_16915 0.19 +2.1 3,812,326 + AO356_16915 0.19 +1.3 3,812,326 + AO356_16915 0.19 +0.1 3,812,326 + AO356_16915 0.19 +0.3 3,812,326 + AO356_16915 0.19 -0.2 3,812,326 + AO356_16915 0.19 -0.0 3,812,327 - AO356_16915 0.19 +0.5 3,812,327 - AO356_16915 0.19 -1.3 3,812,327 - AO356_16915 0.19 +1.1 3,812,327 - AO356_16915 0.19 +0.3 3,812,327 - AO356_16915 0.19 +0.7 3,812,330 + AO356_16915 0.20 -0.1 3,812,330 + AO356_16915 0.20 +0.4 3,812,330 + AO356_16915 0.20 +0.3 3,812,330 + AO356_16915 0.20 -0.5 3,812,330 + AO356_16915 0.20 +0.9 3,812,330 + AO356_16915 0.20 +0.1 3,812,330 + AO356_16915 0.20 -0.3 3,812,330 + AO356_16915 0.20 -0.8 3,812,330 + AO356_16915 0.20 +0.5 3,812,330 + AO356_16915 0.20 +1.2 3,812,331 - AO356_16915 0.20 -0.2 3,812,331 - AO356_16915 0.20 -0.4 3,812,331 - AO356_16915 0.20 +1.2 3,812,331 - AO356_16915 0.20 +1.1 3,812,331 - AO356_16915 0.20 -0.0 3,812,331 - AO356_16915 0.20 +1.2 3,812,331 - AO356_16915 0.20 +0.4 3,812,331 - AO356_16915 0.20 +0.9 3,812,331 - AO356_16915 0.20 +1.2 3,812,331 - AO356_16915 0.20 +0.5 3,812,382 - AO356_16915 0.26 +1.0 3,812,450 + AO356_16915 0.33 -0.5 3,812,450 + AO356_16915 0.33 -0.7 3,812,451 - AO356_16915 0.33 +0.4 3,812,451 - AO356_16915 0.33 +0.9 3,812,451 - AO356_16915 0.33 -1.4 3,812,451 - AO356_16915 0.33 +0.2 3,812,451 - AO356_16915 0.33 +2.3 3,812,451 - AO356_16915 0.33 -0.5 3,812,732 + AO356_16915 0.66 -0.2 3,812,732 + AO356_16915 0.66 -1.6 3,812,733 - AO356_16915 0.66 -0.4 3,812,733 - AO356_16915 0.66 +0.9 3,812,794 + AO356_16915 0.73 +0.4 3,812,847 + AO356_16915 0.79 +1.0 3,812,867 + AO356_16915 0.81 -1.0 3,812,867 + AO356_16915 0.81 -0.5 3,812,867 + AO356_16915 0.81 -0.3 3,812,867 + AO356_16915 0.81 +0.3 3,812,867 + AO356_16915 0.81 +1.0 3,812,867 + AO356_16915 0.81 +0.5 3,812,868 - AO356_16915 0.81 -0.5 3,812,868 - AO356_16915 0.81 -0.4 3,812,868 - AO356_16915 0.81 -1.5 3,812,868 - AO356_16915 0.81 -0.5 3,812,868 - AO356_16915 0.81 -0.5 3,812,868 - AO356_16915 0.81 +1.5 3,812,880 + AO356_16915 0.82 -1.6 3,812,880 + AO356_16915 0.82 +0.5 3,812,880 + AO356_16915 0.82 -0.3 3,812,880 + AO356_16915 0.82 -0.8 3,812,880 + AO356_16915 0.82 -0.6 3,812,880 + AO356_16915 0.82 +0.2 3,812,880 + AO356_16915 0.82 -0.1 3,812,880 + AO356_16915 0.82 +0.8 3,812,880 + AO356_16915 0.82 -1.6 3,812,880 + AO356_16915 0.82 +1.4 3,812,880 + AO356_16915 0.82 +1.0 3,812,881 - AO356_16915 0.83 +0.2 3,812,881 - AO356_16915 0.83 -0.9 3,812,881 - AO356_16915 0.83 -1.8 3,812,881 - AO356_16915 0.83 +0.7 3,812,881 - AO356_16915 0.83 +0.9 3,812,881 - AO356_16915 0.83 -0.9 3,812,881 - AO356_16915 0.83 -0.0 3,812,881 - AO356_16915 0.83 -0.1 3,812,881 - AO356_16915 0.83 +0.0 3,812,881 - AO356_16915 0.83 -0.1 3,812,881 - AO356_16915 0.83 -0.9 3,812,881 - AO356_16915 0.83 +0.8 3,812,881 - AO356_16915 0.83 +0.3 3,812,881 - AO356_16915 0.83 -0.2 3,812,881 - AO356_16915 0.83 +0.5 3,812,881 - AO356_16915 0.83 +0.4 3,812,881 - AO356_16915 0.83 -0.5 3,812,881 - AO356_16915 0.83 -0.9 3,812,881 - AO356_16915 0.83 -1.8 3,812,900 + AO356_16915 0.85 -0.5 3,812,901 - AO356_16915 0.85 -0.8 3,812,901 - AO356_16915 0.85 +0.1
Or see this region's nucleotide sequence