Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12230 and AO356_12235 are separated by 12 nucleotides AO356_12235 and AO356_12240 are separated by 18 nucleotides
AO356_12230: AO356_12230 - type IV secretion protein Rhs, at 2,786,822 to 2,791,261
_12230
AO356_12235: AO356_12235 - hypothetical protein, at 2,791,274 to 2,791,708
_12235
AO356_12240: AO356_12240 - type VI secretion protein ImpA, at 2,791,727 to 2,793,664
_12240
Position (kb)
2791
2792 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2790.279 kb on + strand, within AO356_12230 at 2790.280 kb on - strand, within AO356_12230 at 2790.280 kb on - strand, within AO356_12230 at 2790.280 kb on - strand, within AO356_12230 at 2790.280 kb on - strand, within AO356_12230 at 2790.422 kb on - strand, within AO356_12230 at 2790.469 kb on + strand, within AO356_12230 at 2790.482 kb on - strand, within AO356_12230 at 2790.614 kb on + strand, within AO356_12230 at 2790.831 kb on + strand at 2790.831 kb on + strand at 2790.832 kb on - strand at 2790.832 kb on - strand at 2790.832 kb on - strand at 2791.004 kb on + strand at 2791.004 kb on + strand at 2791.004 kb on + strand at 2791.004 kb on + strand at 2791.004 kb on + strand at 2791.359 kb on + strand, within AO356_12235 at 2791.359 kb on + strand, within AO356_12235 at 2791.360 kb on - strand, within AO356_12235 at 2791.360 kb on - strand, within AO356_12235 at 2791.360 kb on - strand, within AO356_12235 at 2791.701 kb on + strand at 2791.701 kb on + strand at 2791.872 kb on + strand at 2791.872 kb on + strand at 2791.872 kb on + strand at 2791.872 kb on + strand at 2791.873 kb on - strand at 2791.873 kb on - strand at 2791.886 kb on + strand at 2791.943 kb on + strand, within AO356_12240 at 2791.943 kb on + strand, within AO356_12240 at 2791.944 kb on - strand, within AO356_12240 at 2791.944 kb on - strand, within AO356_12240 at 2791.944 kb on - strand, within AO356_12240 at 2791.944 kb on - strand, within AO356_12240 at 2791.944 kb on - strand, within AO356_12240 at 2791.977 kb on + strand, within AO356_12240 at 2791.977 kb on + strand, within AO356_12240 at 2792.150 kb on - strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.166 kb on + strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.167 kb on - strand, within AO356_12240 at 2792.307 kb on + strand, within AO356_12240 at 2792.479 kb on - strand, within AO356_12240 at 2792.543 kb on + strand, within AO356_12240 at 2792.617 kb on + strand, within AO356_12240 at 2792.688 kb on + strand, within AO356_12240 at 2792.688 kb on + strand, within AO356_12240 at 2792.688 kb on + strand, within AO356_12240 at 2792.688 kb on + strand, within AO356_12240 at 2792.688 kb on + strand, within AO356_12240 at 2792.689 kb on - strand, within AO356_12240 at 2792.689 kb on - strand, within AO356_12240 at 2792.689 kb on - strand, within AO356_12240 at 2792.689 kb on - strand, within AO356_12240 at 2792.692 kb on - strand, within AO356_12240
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,790,279 + AO356_12230 0.78 +2.5 2,790,280 - AO356_12230 0.78 -1.0 2,790,280 - AO356_12230 0.78 -2.3 2,790,280 - AO356_12230 0.78 +1.0 2,790,280 - AO356_12230 0.78 +0.0 2,790,422 - AO356_12230 0.81 -0.2 2,790,469 + AO356_12230 0.82 -0.0 2,790,482 - AO356_12230 0.82 +0.3 2,790,614 + AO356_12230 0.85 -1.1 2,790,831 + -0.0 2,790,831 + -0.1 2,790,832 - -2.0 2,790,832 - +0.7 2,790,832 - -0.0 2,791,004 + +0.3 2,791,004 + +0.0 2,791,004 + -0.1 2,791,004 + -0.2 2,791,004 + -0.3 2,791,359 + AO356_12235 0.20 +0.7 2,791,359 + AO356_12235 0.20 -0.3 2,791,360 - AO356_12235 0.20 +0.7 2,791,360 - AO356_12235 0.20 +1.3 2,791,360 - AO356_12235 0.20 +1.2 2,791,701 + +2.5 2,791,701 + +2.7 2,791,872 + -0.3 2,791,872 + +0.2 2,791,872 + -0.6 2,791,872 + +0.6 2,791,873 - -0.4 2,791,873 - +0.2 2,791,886 + +0.7 2,791,943 + AO356_12240 0.11 +1.0 2,791,943 + AO356_12240 0.11 +1.1 2,791,944 - AO356_12240 0.11 -0.1 2,791,944 - AO356_12240 0.11 +0.4 2,791,944 - AO356_12240 0.11 -0.9 2,791,944 - AO356_12240 0.11 +1.5 2,791,944 - AO356_12240 0.11 +0.2 2,791,977 + AO356_12240 0.13 +0.2 2,791,977 + AO356_12240 0.13 +0.7 2,792,150 - AO356_12240 0.22 -0.3 2,792,166 + AO356_12240 0.23 -1.3 2,792,166 + AO356_12240 0.23 +0.7 2,792,166 + AO356_12240 0.23 -0.6 2,792,166 + AO356_12240 0.23 -0.0 2,792,166 + AO356_12240 0.23 +1.0 2,792,166 + AO356_12240 0.23 -0.3 2,792,167 - AO356_12240 0.23 +0.0 2,792,167 - AO356_12240 0.23 -0.9 2,792,167 - AO356_12240 0.23 -2.3 2,792,167 - AO356_12240 0.23 +0.8 2,792,167 - AO356_12240 0.23 +0.0 2,792,167 - AO356_12240 0.23 -0.1 2,792,167 - AO356_12240 0.23 +1.0 2,792,307 + AO356_12240 0.30 +0.5 2,792,479 - AO356_12240 0.39 +1.1 2,792,543 + AO356_12240 0.42 +1.4 2,792,617 + AO356_12240 0.46 +1.0 2,792,688 + AO356_12240 0.50 +0.4 2,792,688 + AO356_12240 0.50 -0.4 2,792,688 + AO356_12240 0.50 -1.3 2,792,688 + AO356_12240 0.50 +0.3 2,792,688 + AO356_12240 0.50 -0.0 2,792,689 - AO356_12240 0.50 +0.6 2,792,689 - AO356_12240 0.50 +0.5 2,792,689 - AO356_12240 0.50 +0.3 2,792,689 - AO356_12240 0.50 +1.4 2,792,692 - AO356_12240 0.50 +0.1
Or see this region's nucleotide sequence