Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07975 and AO356_07980 are separated by 11 nucleotides AO356_07980 and AO356_07985 overlap by 1 nucleotides
AO356_07975: AO356_07975 - ABC transporter, at 1,787,031 to 1,788,584
_07975
AO356_07980: AO356_07980 - sugar ABC transporter permease, at 1,788,596 to 1,789,702
_07980
AO356_07985: AO356_07985 - ABC transporter permease, at 1,789,702 to 1,790,628
_07985
Position (kb)
1788
1789
1790 Strain fitness (log2 ratio)
-1
0
1
2 at 1787.621 kb on + strand, within AO356_07975 at 1787.621 kb on + strand, within AO356_07975 at 1787.622 kb on - strand, within AO356_07975 at 1787.775 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1788.214 kb on + strand, within AO356_07975 at 1788.580 kb on + strand at 1788.658 kb on - strand at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.836 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.450 kb on + strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.726 kb on - strand at 1789.726 kb on - strand at 1789.732 kb on + strand at 1790.074 kb on - strand, within AO356_07985 at 1790.102 kb on + strand, within AO356_07985 at 1790.103 kb on - strand, within AO356_07985 at 1790.103 kb on - strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.397 kb on - strand, within AO356_07985 at 1790.437 kb on + strand, within AO356_07985 at 1790.437 kb on + strand, within AO356_07985 at 1790.438 kb on - strand, within AO356_07985 at 1790.540 kb on + strand at 1790.540 kb on + strand at 1790.540 kb on + strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.584 kb on + strand at 1790.631 kb on + strand at 1790.632 kb on - strand at 1790.647 kb on + strand at 1790.647 kb on + strand at 1790.648 kb on - strand at 1790.648 kb on - strand at 1790.673 kb on + strand at 1790.674 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,787,621 + AO356_07975 0.38 -0.7 1,787,621 + AO356_07975 0.38 +0.6 1,787,622 - AO356_07975 0.38 -0.6 1,787,775 + AO356_07975 0.48 +1.3 1,787,816 + AO356_07975 0.51 +0.2 1,787,816 + AO356_07975 0.51 +0.5 1,787,816 + AO356_07975 0.51 -0.8 1,787,816 + AO356_07975 0.51 -0.3 1,787,816 + AO356_07975 0.51 +0.8 1,787,816 + AO356_07975 0.51 +1.1 1,787,816 + AO356_07975 0.51 -0.4 1,787,816 + AO356_07975 0.51 -0.1 1,787,816 + AO356_07975 0.51 +0.0 1,788,214 + AO356_07975 0.76 -1.0 1,788,580 + +1.6 1,788,658 - +0.9 1,788,734 + AO356_07980 0.12 -0.7 1,788,734 + AO356_07980 0.12 +0.3 1,788,734 + AO356_07980 0.12 +0.1 1,788,734 + AO356_07980 0.12 +1.2 1,788,735 - AO356_07980 0.13 +1.2 1,788,735 - AO356_07980 0.13 -0.4 1,788,735 - AO356_07980 0.13 +0.7 1,788,735 - AO356_07980 0.13 -0.8 1,788,735 - AO356_07980 0.13 -0.7 1,788,836 + AO356_07980 0.22 -1.1 1,789,058 + AO356_07980 0.42 +0.0 1,789,058 + AO356_07980 0.42 +0.8 1,789,058 + AO356_07980 0.42 +0.6 1,789,058 + AO356_07980 0.42 -0.1 1,789,058 + AO356_07980 0.42 +0.6 1,789,058 + AO356_07980 0.42 -0.4 1,789,059 - AO356_07980 0.42 -0.4 1,789,059 - AO356_07980 0.42 -0.1 1,789,059 - AO356_07980 0.42 -0.6 1,789,202 + AO356_07980 0.55 -0.4 1,789,202 + AO356_07980 0.55 +1.1 1,789,203 - AO356_07980 0.55 +1.3 1,789,203 - AO356_07980 0.55 +0.6 1,789,203 - AO356_07980 0.55 -0.2 1,789,203 - AO356_07980 0.55 -0.1 1,789,440 - AO356_07980 0.76 +0.1 1,789,440 - AO356_07980 0.76 -0.8 1,789,450 + AO356_07980 0.77 -0.4 1,789,521 - AO356_07980 0.84 +0.0 1,789,521 - AO356_07980 0.84 +0.4 1,789,521 - AO356_07980 0.84 +0.9 1,789,521 - AO356_07980 0.84 -1.2 1,789,521 - AO356_07980 0.84 +0.2 1,789,726 - +0.4 1,789,726 - -0.1 1,789,732 + -0.4 1,790,074 - AO356_07985 0.40 -1.4 1,790,102 + AO356_07985 0.43 +1.0 1,790,103 - AO356_07985 0.43 -0.5 1,790,103 - AO356_07985 0.43 +0.9 1,790,137 + AO356_07985 0.47 +0.8 1,790,137 + AO356_07985 0.47 -0.9 1,790,137 + AO356_07985 0.47 -0.3 1,790,138 - AO356_07985 0.47 +0.6 1,790,138 - AO356_07985 0.47 -0.4 1,790,138 - AO356_07985 0.47 -0.5 1,790,317 + AO356_07985 0.66 +0.1 1,790,317 + AO356_07985 0.66 -0.1 1,790,317 + AO356_07985 0.66 -1.3 1,790,318 - AO356_07985 0.66 -1.0 1,790,318 - AO356_07985 0.66 -0.4 1,790,318 - AO356_07985 0.66 -0.5 1,790,397 - AO356_07985 0.75 -1.4 1,790,437 + AO356_07985 0.79 -0.4 1,790,437 + AO356_07985 0.79 +0.0 1,790,438 - AO356_07985 0.79 -0.4 1,790,540 + +0.5 1,790,540 + +1.9 1,790,540 + +0.4 1,790,541 - +0.4 1,790,541 - -0.1 1,790,541 - -1.4 1,790,541 - -1.3 1,790,541 - -0.4 1,790,541 - +0.2 1,790,584 + -1.4 1,790,631 + +0.3 1,790,632 - -0.4 1,790,647 + -0.3 1,790,647 + -1.0 1,790,648 - -1.3 1,790,648 - +0.4 1,790,673 + -0.7 1,790,674 - +0.2
Or see this region's nucleotide sequence