Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04830 and AO356_04835 are separated by 145 nucleotides AO356_04835 and AO356_04840 overlap by 1 nucleotides AO356_04840 and AO356_04845 are separated by 120 nucleotides AO356_04845 and AO356_04850 are separated by 159 nucleotides
AO356_04830: AO356_04830 - acyl-CoA dehydrogenase, at 1,086,933 to 1,087,805
_04830
AO356_04835: AO356_04835 - hemolysin, at 1,087,951 to 1,088,706
_04835
AO356_04840: AO356_04840 - glycerol acyltransferase, at 1,088,706 to 1,089,497
_04840
AO356_04845: AO356_04845 - ACP phosphodiesterase, at 1,089,618 to 1,090,202
_04845
AO356_04850: AO356_04850 - ArsR family transcriptional regulator, at 1,090,362 to 1,090,664
_04850
Position (kb)
1088
1089
1090 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1087.738 kb on + strand at 1087.739 kb on - strand at 1087.739 kb on - strand at 1087.760 kb on - strand at 1087.767 kb on + strand at 1087.830 kb on + strand at 1087.830 kb on + strand at 1087.830 kb on + strand at 1087.830 kb on + strand at 1087.831 kb on - strand at 1087.831 kb on - strand at 1087.831 kb on - strand at 1087.831 kb on - strand at 1087.831 kb on - strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.832 kb on + strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.833 kb on - strand at 1087.870 kb on + strand at 1087.870 kb on + strand at 1087.870 kb on + strand at 1087.870 kb on + strand at 1087.870 kb on + strand at 1087.871 kb on - strand at 1087.874 kb on + strand at 1087.874 kb on + strand at 1087.874 kb on + strand at 1087.874 kb on + strand at 1087.874 kb on + strand at 1087.874 kb on + strand at 1087.875 kb on - strand at 1087.875 kb on - strand at 1087.875 kb on - strand at 1087.875 kb on - strand at 1087.875 kb on - strand at 1087.875 kb on - strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1088.122 kb on + strand, within AO356_04835 at 1088.122 kb on + strand, within AO356_04835 at 1088.122 kb on + strand, within AO356_04835 at 1088.122 kb on + strand, within AO356_04835 at 1088.122 kb on + strand, within AO356_04835 at 1088.122 kb on + strand, within AO356_04835 at 1088.123 kb on - strand, within AO356_04835 at 1088.123 kb on - strand, within AO356_04835 at 1088.123 kb on - strand, within AO356_04835 at 1088.298 kb on + strand, within AO356_04835 at 1088.384 kb on - strand, within AO356_04835 at 1088.389 kb on + strand, within AO356_04835 at 1088.389 kb on + strand, within AO356_04835 at 1088.389 kb on + strand, within AO356_04835 at 1088.390 kb on - strand, within AO356_04835 at 1088.390 kb on - strand, within AO356_04835 at 1088.390 kb on - strand, within AO356_04835 at 1088.470 kb on + strand, within AO356_04835 at 1088.471 kb on - strand, within AO356_04835 at 1088.471 kb on - strand, within AO356_04835 at 1088.528 kb on + strand, within AO356_04835 at 1088.528 kb on + strand, within AO356_04835 at 1088.528 kb on + strand, within AO356_04835 at 1088.529 kb on - strand, within AO356_04835 at 1088.529 kb on - strand, within AO356_04835 at 1088.529 kb on - strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.572 kb on + strand, within AO356_04835 at 1088.573 kb on - strand, within AO356_04835 at 1088.573 kb on - strand, within AO356_04835 at 1088.573 kb on - strand, within AO356_04835 at 1088.573 kb on - strand, within AO356_04835 at 1088.678 kb on - strand at 1088.704 kb on + strand at 1088.704 kb on + strand at 1088.705 kb on - strand at 1088.705 kb on - strand at 1088.705 kb on - strand at 1088.724 kb on + strand at 1088.725 kb on - strand at 1088.725 kb on - strand at 1088.725 kb on - strand at 1089.558 kb on + strand at 1089.558 kb on + strand at 1089.558 kb on + strand at 1089.584 kb on + strand at 1089.584 kb on + strand at 1089.585 kb on - strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.619 kb on + strand at 1089.668 kb on - strand at 1089.700 kb on + strand, within AO356_04845 at 1089.701 kb on - strand, within AO356_04845 at 1089.701 kb on - strand, within AO356_04845 at 1089.774 kb on + strand, within AO356_04845 at 1089.802 kb on + strand, within AO356_04845 at 1089.803 kb on - strand, within AO356_04845 at 1089.830 kb on + strand, within AO356_04845 at 1089.830 kb on + strand, within AO356_04845 at 1089.832 kb on + strand, within AO356_04845 at 1089.833 kb on - strand, within AO356_04845 at 1089.882 kb on + strand, within AO356_04845 at 1089.883 kb on - strand, within AO356_04845 at 1089.883 kb on - strand, within AO356_04845 at 1089.928 kb on + strand, within AO356_04845 at 1089.928 kb on + strand, within AO356_04845 at 1089.929 kb on - strand, within AO356_04845 at 1089.989 kb on - strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.051 kb on + strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.052 kb on - strand, within AO356_04845 at 1090.102 kb on + strand, within AO356_04845 at 1090.103 kb on - strand, within AO356_04845 at 1090.103 kb on - strand, within AO356_04845 at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.195 kb on + strand at 1090.196 kb on - strand at 1090.196 kb on - strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.214 kb on + strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.215 kb on - strand at 1090.237 kb on + strand at 1090.238 kb on - strand at 1090.239 kb on + strand at 1090.249 kb on + strand at 1090.299 kb on + strand at 1090.320 kb on - strand at 1090.384 kb on + strand at 1090.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,087,738 + -0.1 1,087,739 - +0.5 1,087,739 - +1.2 1,087,760 - +0.5 1,087,767 + -1.1 1,087,830 + +0.3 1,087,830 + -1.1 1,087,830 + +0.9 1,087,830 + +1.0 1,087,831 - -0.7 1,087,831 - +0.1 1,087,831 - +0.5 1,087,831 - +0.5 1,087,831 - +1.5 1,087,832 + -0.2 1,087,832 + +2.1 1,087,832 + -1.3 1,087,832 + +1.3 1,087,832 + +0.1 1,087,832 + +0.5 1,087,832 + -0.1 1,087,832 + -0.1 1,087,832 + +0.3 1,087,832 + -1.0 1,087,832 + +0.0 1,087,832 + +0.5 1,087,833 - -0.8 1,087,833 - +0.7 1,087,833 - -0.3 1,087,833 - +0.1 1,087,833 - +0.9 1,087,833 - -0.5 1,087,833 - +0.5 1,087,833 - +0.2 1,087,833 - +0.3 1,087,833 - -1.3 1,087,870 + -0.1 1,087,870 + -0.6 1,087,870 + -0.9 1,087,870 + +1.1 1,087,870 + -0.6 1,087,871 - -0.6 1,087,874 + -0.5 1,087,874 + -0.5 1,087,874 + +0.5 1,087,874 + +1.3 1,087,874 + +0.5 1,087,874 + +0.5 1,087,875 - +0.5 1,087,875 - +0.1 1,087,875 - -1.0 1,087,875 - -1.0 1,087,875 - -1.7 1,087,875 - +0.7 1,087,902 + +0.0 1,087,902 + +0.5 1,087,902 + +0.7 1,088,122 + AO356_04835 0.23 +1.1 1,088,122 + AO356_04835 0.23 +0.0 1,088,122 + AO356_04835 0.23 -0.1 1,088,122 + AO356_04835 0.23 -1.3 1,088,122 + AO356_04835 0.23 +0.3 1,088,122 + AO356_04835 0.23 +1.1 1,088,123 - AO356_04835 0.23 -0.1 1,088,123 - AO356_04835 0.23 +0.2 1,088,123 - AO356_04835 0.23 -0.5 1,088,298 + AO356_04835 0.46 +0.5 1,088,384 - AO356_04835 0.57 -1.4 1,088,389 + AO356_04835 0.58 +0.7 1,088,389 + AO356_04835 0.58 +0.3 1,088,389 + AO356_04835 0.58 -0.5 1,088,390 - AO356_04835 0.58 +1.1 1,088,390 - AO356_04835 0.58 +2.1 1,088,390 - AO356_04835 0.58 +0.8 1,088,470 + AO356_04835 0.69 +1.2 1,088,471 - AO356_04835 0.69 -1.1 1,088,471 - AO356_04835 0.69 +0.8 1,088,528 + AO356_04835 0.76 -0.3 1,088,528 + AO356_04835 0.76 +0.7 1,088,528 + AO356_04835 0.76 -0.3 1,088,529 - AO356_04835 0.76 +0.3 1,088,529 - AO356_04835 0.76 -0.1 1,088,529 - AO356_04835 0.76 +0.7 1,088,572 + AO356_04835 0.82 +0.5 1,088,572 + AO356_04835 0.82 -1.5 1,088,572 + AO356_04835 0.82 -0.1 1,088,572 + AO356_04835 0.82 -1.3 1,088,572 + AO356_04835 0.82 +0.1 1,088,572 + AO356_04835 0.82 -1.9 1,088,573 - AO356_04835 0.82 -0.5 1,088,573 - AO356_04835 0.82 -1.5 1,088,573 - AO356_04835 0.82 -0.4 1,088,573 - AO356_04835 0.82 +0.7 1,088,678 - +0.7 1,088,704 + +0.3 1,088,704 + -0.6 1,088,705 - +0.5 1,088,705 - -0.5 1,088,705 - -0.3 1,088,724 + +0.5 1,088,725 - +0.0 1,088,725 - +0.7 1,088,725 - +1.9 1,089,558 + -0.1 1,089,558 + +1.0 1,089,558 + -0.0 1,089,584 + -1.5 1,089,584 + +0.0 1,089,585 - -0.5 1,089,619 + -0.0 1,089,619 + -0.4 1,089,619 + +1.1 1,089,619 + -0.1 1,089,619 + +0.2 1,089,668 - +1.1 1,089,700 + AO356_04845 0.14 +0.7 1,089,701 - AO356_04845 0.14 -0.9 1,089,701 - AO356_04845 0.14 -0.3 1,089,774 + AO356_04845 0.27 +0.5 1,089,802 + AO356_04845 0.31 +0.1 1,089,803 - AO356_04845 0.32 -0.3 1,089,830 + AO356_04845 0.36 +0.3 1,089,830 + AO356_04845 0.36 +0.5 1,089,832 + AO356_04845 0.37 -0.8 1,089,833 - AO356_04845 0.37 +0.5 1,089,882 + AO356_04845 0.45 +1.0 1,089,883 - AO356_04845 0.45 -1.8 1,089,883 - AO356_04845 0.45 +0.7 1,089,928 + AO356_04845 0.53 -0.1 1,089,928 + AO356_04845 0.53 +0.5 1,089,929 - AO356_04845 0.53 -0.2 1,089,989 - AO356_04845 0.63 +0.8 1,090,051 + AO356_04845 0.74 +0.3 1,090,051 + AO356_04845 0.74 +1.1 1,090,051 + AO356_04845 0.74 +0.8 1,090,051 + AO356_04845 0.74 +0.6 1,090,052 - AO356_04845 0.74 -1.1 1,090,052 - AO356_04845 0.74 +0.5 1,090,052 - AO356_04845 0.74 -1.2 1,090,052 - AO356_04845 0.74 -0.1 1,090,052 - AO356_04845 0.74 -2.0 1,090,102 + AO356_04845 0.83 +1.3 1,090,103 - AO356_04845 0.83 +0.8 1,090,103 - AO356_04845 0.83 +0.5 1,090,195 + +1.5 1,090,195 + +0.8 1,090,195 + -0.1 1,090,195 + +1.1 1,090,196 - -0.1 1,090,196 - -0.7 1,090,214 + +1.6 1,090,214 + +0.1 1,090,214 + +0.9 1,090,214 + +0.2 1,090,215 - +0.2 1,090,215 - +0.3 1,090,215 - -1.3 1,090,215 - +0.7 1,090,237 + +0.8 1,090,238 - -1.1 1,090,239 + -1.1 1,090,249 + -0.7 1,090,299 + +0.3 1,090,320 - +0.5 1,090,384 + +1.2 1,090,387 + +1.2
Or see this region's nucleotide sequence