Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04645 and AO356_04650 are separated by 15 nucleotides AO356_04650 and AO356_04655 overlap by 4 nucleotides AO356_04655 and AO356_04660 are separated by 13 nucleotides AO356_04660 and AO356_04665 are separated by 11 nucleotides
AO356_04645: AO356_04645 - lipid kinase, at 1,046,266 to 1,047,333
_04645
AO356_04650: AO356_04650 - lipid kinase, at 1,047,349 to 1,048,164
_04650
AO356_04655: AO356_04655 - lauroyl acyltransferase, at 1,048,161 to 1,048,949
_04655
AO356_04660: AO356_04660 - urea carboxylase, at 1,048,963 to 1,049,688
_04660
AO356_04665: AO356_04665 - urea carboxylase, at 1,049,700 to 1,050,341
_04665
Position (kb)
1048
1049 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.495 kb on - strand, within AO356_04650 at 1047.495 kb on - strand, within AO356_04650 at 1047.553 kb on + strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1048.066 kb on + strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.144 kb on + strand at 1048.145 kb on - strand at 1048.145 kb on - strand at 1048.307 kb on - strand, within AO356_04655 at 1048.404 kb on + strand, within AO356_04655 at 1048.565 kb on + strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.569 kb on + strand, within AO356_04655 at 1048.840 kb on - strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.858 kb on - strand, within AO356_04655 at 1048.986 kb on + strand at 1049.103 kb on - strand, within AO356_04660 at 1049.296 kb on + strand, within AO356_04660 at 1049.312 kb on - strand, within AO356_04660 at 1049.488 kb on + strand, within AO356_04660 at 1049.488 kb on + strand, within AO356_04660 at 1049.488 kb on + strand, within AO356_04660 at 1049.500 kb on + strand, within AO356_04660 at 1049.500 kb on + strand, within AO356_04660 at 1049.501 kb on - strand, within AO356_04660 at 1049.566 kb on + strand, within AO356_04660 at 1049.748 kb on + strand at 1049.856 kb on + strand, within AO356_04665 at 1049.856 kb on + strand, within AO356_04665 at 1049.856 kb on + strand, within AO356_04665 at 1049.856 kb on + strand, within AO356_04665 at 1049.863 kb on + strand, within AO356_04665 at 1049.890 kb on + strand, within AO356_04665 at 1049.890 kb on + strand, within AO356_04665 at 1049.890 kb on + strand, within AO356_04665 at 1049.890 kb on + strand, within AO356_04665 at 1049.890 kb on + strand, within AO356_04665 at 1049.891 kb on - strand, within AO356_04665 at 1049.891 kb on - strand, within AO356_04665 at 1049.923 kb on - strand, within AO356_04665 at 1049.946 kb on + strand, within AO356_04665 at 1049.947 kb on - strand, within AO356_04665
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,047,301 + -1.0 1,047,301 + -0.3 1,047,301 + +0.1 1,047,301 + -1.1 1,047,302 - -2.0 1,047,302 - -0.3 1,047,302 - -1.0 1,047,302 - -1.5 1,047,302 - -1.5 1,047,302 - -0.9 1,047,305 + -0.2 1,047,305 + +1.0 1,047,305 + +0.5 1,047,305 + -0.3 1,047,305 + -0.3 1,047,306 - +1.5 1,047,306 - -0.6 1,047,306 - -0.3 1,047,306 - -0.2 1,047,495 - AO356_04650 0.18 +0.8 1,047,495 - AO356_04650 0.18 +1.2 1,047,553 + AO356_04650 0.25 -0.5 1,047,554 - AO356_04650 0.25 -0.3 1,047,554 - AO356_04650 0.25 -1.2 1,047,918 - AO356_04650 0.70 -0.1 1,047,918 - AO356_04650 0.70 -0.5 1,048,066 + AO356_04650 0.88 -1.4 1,048,067 - AO356_04650 0.88 +0.8 1,048,067 - AO356_04650 0.88 +0.7 1,048,144 + +0.5 1,048,145 - -0.3 1,048,145 - +0.5 1,048,307 - AO356_04655 0.19 +0.5 1,048,404 + AO356_04655 0.31 -1.1 1,048,565 + AO356_04655 0.51 -0.1 1,048,566 - AO356_04655 0.51 -1.5 1,048,566 - AO356_04655 0.51 +1.5 1,048,566 - AO356_04655 0.51 +1.5 1,048,566 - AO356_04655 0.51 +0.1 1,048,569 + AO356_04655 0.52 -1.9 1,048,840 - AO356_04655 0.86 +1.3 1,048,857 + AO356_04655 0.88 -0.3 1,048,857 + AO356_04655 0.88 -1.7 1,048,857 + AO356_04655 0.88 -1.5 1,048,857 + AO356_04655 0.88 -1.4 1,048,858 - AO356_04655 0.88 +0.5 1,048,986 + -1.1 1,049,103 - AO356_04660 0.19 -0.3 1,049,296 + AO356_04660 0.46 -1.0 1,049,312 - AO356_04660 0.48 +0.8 1,049,488 + AO356_04660 0.72 -1.6 1,049,488 + AO356_04660 0.72 -1.6 1,049,488 + AO356_04660 0.72 -0.5 1,049,500 + AO356_04660 0.74 -1.1 1,049,500 + AO356_04660 0.74 -0.6 1,049,501 - AO356_04660 0.74 +0.1 1,049,566 + AO356_04660 0.83 -1.5 1,049,748 + +0.1 1,049,856 + AO356_04665 0.24 -0.5 1,049,856 + AO356_04665 0.24 -1.3 1,049,856 + AO356_04665 0.24 -0.4 1,049,856 + AO356_04665 0.24 +1.0 1,049,863 + AO356_04665 0.25 -0.1 1,049,890 + AO356_04665 0.30 -3.2 1,049,890 + AO356_04665 0.30 +0.1 1,049,890 + AO356_04665 0.30 -0.8 1,049,890 + AO356_04665 0.30 -1.1 1,049,890 + AO356_04665 0.30 +0.5 1,049,891 - AO356_04665 0.30 -0.2 1,049,891 - AO356_04665 0.30 -0.9 1,049,923 - AO356_04665 0.35 +0.6 1,049,946 + AO356_04665 0.38 -2.1 1,049,947 - AO356_04665 0.38 +0.1
Or see this region's nucleotide sequence