Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04605 and AO356_04610 overlap by 8 nucleotides AO356_04610 and AO356_04615 are separated by 457 nucleotides
AO356_04605: AO356_04605 - histidine kinase, at 1,036,613 to 1,038,004
_04605
AO356_04610: AO356_04610 - transcriptional regulator, at 1,037,997 to 1,038,668
_04610
AO356_04615: AO356_04615 - tricarboxylic transporter, at 1,039,126 to 1,040,118
_04615
Position (kb)
1037
1038
1039 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1037.233 kb on + strand, within AO356_04605 at 1037.489 kb on + strand, within AO356_04605 at 1037.490 kb on - strand, within AO356_04605 at 1037.629 kb on - strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.640 kb on + strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.641 kb on - strand, within AO356_04605 at 1037.661 kb on + strand, within AO356_04605 at 1037.748 kb on + strand, within AO356_04605 at 1037.749 kb on - strand, within AO356_04605 at 1037.749 kb on - strand, within AO356_04605 at 1037.749 kb on - strand, within AO356_04605 at 1037.751 kb on + strand, within AO356_04605 at 1037.751 kb on + strand, within AO356_04605 at 1037.752 kb on - strand, within AO356_04605 at 1037.772 kb on + strand, within AO356_04605 at 1037.773 kb on - strand, within AO356_04605 at 1037.796 kb on + strand, within AO356_04605 at 1037.797 kb on - strand, within AO356_04605 at 1037.881 kb on - strand at 1037.914 kb on - strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.943 kb on - strand at 1037.943 kb on - strand at 1037.998 kb on + strand at 1037.998 kb on + strand at 1037.999 kb on - strand at 1037.999 kb on - strand at 1037.999 kb on - strand at 1037.999 kb on - strand at 1038.022 kb on + strand at 1038.091 kb on + strand, within AO356_04610 at 1038.091 kb on + strand, within AO356_04610 at 1038.092 kb on - strand, within AO356_04610 at 1038.092 kb on - strand, within AO356_04610 at 1038.092 kb on - strand, within AO356_04610 at 1038.246 kb on - strand, within AO356_04610 at 1038.269 kb on - strand, within AO356_04610 at 1038.310 kb on - strand, within AO356_04610 at 1038.376 kb on + strand, within AO356_04610 at 1038.376 kb on + strand, within AO356_04610 at 1038.377 kb on - strand, within AO356_04610 at 1038.536 kb on - strand, within AO356_04610 at 1038.536 kb on - strand, within AO356_04610 at 1038.536 kb on - strand, within AO356_04610 at 1038.579 kb on + strand, within AO356_04610 at 1038.673 kb on + strand at 1038.673 kb on + strand at 1038.673 kb on + strand at 1038.720 kb on + strand at 1038.720 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.795 kb on + strand at 1038.796 kb on - strand at 1038.796 kb on - strand at 1038.796 kb on - strand at 1038.796 kb on - strand at 1038.796 kb on - strand at 1038.877 kb on + strand at 1038.877 kb on + strand at 1038.877 kb on + strand at 1038.878 kb on - strand at 1038.878 kb on - strand at 1038.878 kb on - strand at 1038.886 kb on + strand at 1038.886 kb on + strand at 1038.887 kb on - strand at 1038.887 kb on - strand at 1038.916 kb on - strand at 1039.005 kb on + strand at 1039.006 kb on - strand at 1039.133 kb on + strand at 1039.133 kb on + strand at 1039.134 kb on - strand at 1039.134 kb on - strand at 1039.134 kb on - strand at 1039.134 kb on - strand at 1039.134 kb on - strand at 1039.143 kb on + strand at 1039.143 kb on + strand at 1039.143 kb on + strand at 1039.144 kb on - strand at 1039.144 kb on - strand at 1039.148 kb on + strand at 1039.149 kb on - strand at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.333 kb on + strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.334 kb on - strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.363 kb on + strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.364 kb on - strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.507 kb on + strand, within AO356_04615 at 1039.508 kb on - strand, within AO356_04615 at 1039.508 kb on - strand, within AO356_04615 at 1039.540 kb on + strand, within AO356_04615 at 1039.541 kb on - strand, within AO356_04615
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,037,233 + AO356_04605 0.45 +0.1 1,037,489 + AO356_04605 0.63 -0.2 1,037,490 - AO356_04605 0.63 -0.7 1,037,629 - AO356_04605 0.73 -2.1 1,037,640 + AO356_04605 0.74 +0.6 1,037,640 + AO356_04605 0.74 +0.1 1,037,640 + AO356_04605 0.74 -0.1 1,037,640 + AO356_04605 0.74 -0.8 1,037,640 + AO356_04605 0.74 +1.0 1,037,640 + AO356_04605 0.74 +0.4 1,037,641 - AO356_04605 0.74 +0.4 1,037,641 - AO356_04605 0.74 -0.2 1,037,641 - AO356_04605 0.74 +0.3 1,037,641 - AO356_04605 0.74 -0.7 1,037,641 - AO356_04605 0.74 -0.7 1,037,641 - AO356_04605 0.74 -1.3 1,037,641 - AO356_04605 0.74 -0.1 1,037,661 + AO356_04605 0.75 -1.0 1,037,748 + AO356_04605 0.82 -0.4 1,037,749 - AO356_04605 0.82 -0.7 1,037,749 - AO356_04605 0.82 -0.5 1,037,749 - AO356_04605 0.82 -0.8 1,037,751 + AO356_04605 0.82 +0.8 1,037,751 + AO356_04605 0.82 -1.3 1,037,752 - AO356_04605 0.82 -1.6 1,037,772 + AO356_04605 0.83 -0.7 1,037,773 - AO356_04605 0.83 -0.2 1,037,796 + AO356_04605 0.85 -1.0 1,037,797 - AO356_04605 0.85 -0.4 1,037,881 - -0.8 1,037,914 - +0.1 1,037,942 + +1.4 1,037,942 + -0.2 1,037,943 - +0.2 1,037,943 - -0.3 1,037,998 + -0.9 1,037,998 + +1.0 1,037,999 - +0.4 1,037,999 - -0.2 1,037,999 - +0.3 1,037,999 - +1.5 1,038,022 + +0.4 1,038,091 + AO356_04610 0.14 -1.1 1,038,091 + AO356_04610 0.14 -0.4 1,038,092 - AO356_04610 0.14 -1.6 1,038,092 - AO356_04610 0.14 -0.6 1,038,092 - AO356_04610 0.14 +0.4 1,038,246 - AO356_04610 0.37 +0.7 1,038,269 - AO356_04610 0.40 +0.9 1,038,310 - AO356_04610 0.47 -1.0 1,038,376 + AO356_04610 0.56 -0.8 1,038,376 + AO356_04610 0.56 -0.7 1,038,377 - AO356_04610 0.57 +0.0 1,038,536 - AO356_04610 0.80 +0.4 1,038,536 - AO356_04610 0.80 +1.0 1,038,536 - AO356_04610 0.80 -0.3 1,038,579 + AO356_04610 0.87 +1.4 1,038,673 + +0.8 1,038,673 + +2.0 1,038,673 + +0.4 1,038,720 + +0.8 1,038,720 + +0.2 1,038,795 + +1.4 1,038,795 + +0.0 1,038,795 + +1.3 1,038,795 + +0.3 1,038,795 + -1.0 1,038,795 + -0.4 1,038,795 + -0.0 1,038,795 + +0.7 1,038,795 + -2.6 1,038,796 - +0.7 1,038,796 - -0.6 1,038,796 - +1.3 1,038,796 - -0.2 1,038,796 - +0.4 1,038,877 + -0.6 1,038,877 + +0.0 1,038,877 + +1.3 1,038,878 - -0.9 1,038,878 - -0.7 1,038,878 - -1.0 1,038,886 + +0.2 1,038,886 + +0.4 1,038,887 - -0.4 1,038,887 - -0.3 1,038,916 - +0.7 1,039,005 + +0.2 1,039,006 - +0.3 1,039,133 + -0.2 1,039,133 + -0.2 1,039,134 - +0.6 1,039,134 - +0.2 1,039,134 - +0.3 1,039,134 - +0.2 1,039,134 - -1.9 1,039,143 + +0.6 1,039,143 + +0.8 1,039,143 + -1.8 1,039,144 - +0.6 1,039,144 - +1.1 1,039,148 + -0.4 1,039,149 - +0.5 1,039,333 + AO356_04615 0.21 -0.2 1,039,333 + AO356_04615 0.21 -0.4 1,039,333 + AO356_04615 0.21 -0.2 1,039,333 + AO356_04615 0.21 +0.9 1,039,333 + AO356_04615 0.21 +0.3 1,039,333 + AO356_04615 0.21 -0.2 1,039,333 + AO356_04615 0.21 +0.7 1,039,334 - AO356_04615 0.21 +0.2 1,039,334 - AO356_04615 0.21 -0.1 1,039,334 - AO356_04615 0.21 +1.5 1,039,334 - AO356_04615 0.21 -0.5 1,039,334 - AO356_04615 0.21 +1.2 1,039,334 - AO356_04615 0.21 +1.0 1,039,363 + AO356_04615 0.24 -0.5 1,039,363 + AO356_04615 0.24 +0.2 1,039,363 + AO356_04615 0.24 +2.0 1,039,363 + AO356_04615 0.24 -0.4 1,039,363 + AO356_04615 0.24 +0.5 1,039,363 + AO356_04615 0.24 -1.5 1,039,364 - AO356_04615 0.24 -0.4 1,039,364 - AO356_04615 0.24 +0.3 1,039,364 - AO356_04615 0.24 -0.8 1,039,364 - AO356_04615 0.24 +0.1 1,039,364 - AO356_04615 0.24 -0.9 1,039,364 - AO356_04615 0.24 -0.4 1,039,507 + AO356_04615 0.38 +0.2 1,039,507 + AO356_04615 0.38 +1.5 1,039,507 + AO356_04615 0.38 +0.2 1,039,507 + AO356_04615 0.38 +1.5 1,039,507 + AO356_04615 0.38 -1.5 1,039,508 - AO356_04615 0.38 -0.5 1,039,508 - AO356_04615 0.38 -0.0 1,039,540 + AO356_04615 0.42 +0.5 1,039,541 - AO356_04615 0.42 -1.1
Or see this region's nucleotide sequence