Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_02330

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_02325 and AO356_02330 are separated by 30 nucleotidesAO356_02330 and AO356_02335 are separated by 590 nucleotides AO356_02325: AO356_02325 - 3-ketoacyl-CoA thiolase, at 502,313 to 503,488 _02325 AO356_02330: AO356_02330 - multifunctional fatty acid oxidation complex subunit alpha, at 503,519 to 505,666 _02330 AO356_02335: AO356_02335 - hypothetical protein, at 506,257 to 506,694 _02335 Position (kb) 503 504 505 506Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 502.633 kb on - strand, within AO356_02325at 502.861 kb on - strand, within AO356_02325at 503.473 kb on + strandat 503.489 kb on - strandat 503.489 kb on - strandat 503.489 kb on - strandat 503.489 kb on - strandat 503.489 kb on - strandat 503.505 kb on + strandat 503.599 kb on - strandat 503.689 kb on - strandat 503.689 kb on - strandat 505.700 kb on - strandat 505.700 kb on - strandat 505.796 kb on + strandat 505.849 kb on + strandat 505.890 kb on + strandat 505.914 kb on + strandat 505.914 kb on + strandat 505.933 kb on + strandat 505.972 kb on + strandat 505.972 kb on + strandat 505.972 kb on + strandat 505.972 kb on + strandat 505.972 kb on + strandat 505.973 kb on - strandat 505.973 kb on - strandat 505.999 kb on + strandat 506.028 kb on + strandat 506.028 kb on + strandat 506.029 kb on - strandat 506.150 kb on - strandat 506.150 kb on - strandat 506.157 kb on + strandat 506.324 kb on + strand, within AO356_02335at 506.324 kb on + strand, within AO356_02335at 506.324 kb on + strand, within AO356_02335at 506.360 kb on + strand, within AO356_02335at 506.360 kb on + strand, within AO356_02335at 506.360 kb on + strand, within AO356_02335at 506.502 kb on - strand, within AO356_02335at 506.620 kb on + strand, within AO356_02335at 506.620 kb on + strand, within AO356_02335at 506.621 kb on - strand, within AO356_02335at 506.653 kb on + strandat 506.654 kb on - strandat 506.654 kb on - strandat 506.654 kb on - strandat 506.654 kb on - strandat 506.654 kb on - strandat 506.654 kb on - strandat 506.654 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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502,633 - AO356_02325 0.27 +1.4
502,861 - AO356_02325 0.47 -0.2
503,473 + -1.0
503,489 - +0.0
503,489 - +1.6
503,489 - +0.2
503,489 - +0.0
503,489 - +1.8
503,505 + +1.0
503,599 - -0.4
503,689 - -1.2
503,689 - +0.4
505,700 - -1.8
505,700 - -0.2
505,796 + -1.2
505,849 + +0.4
505,890 + +0.9
505,914 + +1.2
505,914 + -0.4
505,933 + +0.5
505,972 + -1.1
505,972 + -0.3
505,972 + -0.1
505,972 + -0.4
505,972 + -1.0
505,973 - -1.0
505,973 - +0.6
505,999 + +0.2
506,028 + -0.0
506,028 + -0.3
506,029 - +0.0
506,150 - -0.6
506,150 - +0.4
506,157 + -1.1
506,324 + AO356_02335 0.15 +0.2
506,324 + AO356_02335 0.15 -0.2
506,324 + AO356_02335 0.15 -2.6
506,360 + AO356_02335 0.24 -2.8
506,360 + AO356_02335 0.24 +1.2
506,360 + AO356_02335 0.24 -2.0
506,502 - AO356_02335 0.56 -0.2
506,620 + AO356_02335 0.83 -1.0
506,620 + AO356_02335 0.83 -1.0
506,621 - AO356_02335 0.83 -0.6
506,653 + -0.6
506,654 - -0.6
506,654 - +0.4
506,654 - -1.2
506,654 - +0.4
506,654 - +0.4
506,654 - -0.3
506,654 - -0.9

Or see this region's nucleotide sequence