Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01680 and AO356_01685 are separated by 219 nucleotides AO356_01685 and AO356_01690 are separated by 123 nucleotides AO356_01690 and AO356_01695 are separated by 7 nucleotides
AO356_01680: AO356_01680 - transcriptional regulator, at 377,837 to 378,541
_01680
AO356_01685: AO356_01685 - type IV secretion protein Rhs, at 378,761 to 380,167
_01685
AO356_01690: AO356_01690 - cytochrome B, at 380,291 to 380,839
_01690
AO356_01695: AO356_01695 - 1-aminocyclopropane-1-carboxylate deaminase, at 380,847 to 381,755
_01695
Position (kb) 378
379
380
381 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 377.809 kb on + strand at 377.809 kb on + strand at 377.810 kb on - strand at 377.810 kb on - strand at 377.832 kb on - strand at 377.838 kb on + strand at 377.839 kb on - strand at 378.229 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.294 kb on + strand, within AO356_01680 at 378.295 kb on - strand, within AO356_01680 at 378.295 kb on - strand, within AO356_01680 at 378.309 kb on + strand, within AO356_01680 at 378.310 kb on - strand, within AO356_01680 at 378.521 kb on - strand at 378.543 kb on - strand at 378.543 kb on - strand at 378.601 kb on + strand at 378.601 kb on + strand at 378.601 kb on + strand at 378.602 kb on - strand at 378.602 kb on - strand at 378.671 kb on - strand at 378.750 kb on + strand at 378.751 kb on - strand at 378.751 kb on - strand at 378.904 kb on - strand, within AO356_01685 at 379.040 kb on + strand, within AO356_01685 at 379.149 kb on - strand, within AO356_01685 at 379.175 kb on + strand, within AO356_01685 at 379.260 kb on - strand, within AO356_01685 at 379.388 kb on + strand, within AO356_01685 at 379.388 kb on + strand, within AO356_01685 at 379.389 kb on - strand, within AO356_01685 at 379.411 kb on - strand, within AO356_01685 at 379.411 kb on - strand, within AO356_01685 at 379.411 kb on - strand, within AO356_01685 at 379.854 kb on + strand, within AO356_01685 at 379.854 kb on + strand, within AO356_01685 at 379.855 kb on - strand, within AO356_01685 at 379.855 kb on - strand, within AO356_01685 at 379.855 kb on - strand, within AO356_01685 at 379.855 kb on - strand, within AO356_01685 at 379.855 kb on - strand, within AO356_01685 at 380.233 kb on - strand at 380.233 kb on - strand at 380.233 kb on - strand at 380.237 kb on + strand at 380.237 kb on + strand at 380.323 kb on + strand at 380.323 kb on + strand at 380.323 kb on + strand at 380.324 kb on - strand at 380.324 kb on - strand at 380.582 kb on + strand, within AO356_01690 at 380.583 kb on - strand, within AO356_01690 at 380.654 kb on + strand, within AO356_01690 at 380.654 kb on + strand, within AO356_01690 at 380.654 kb on + strand, within AO356_01690 at 380.654 kb on + strand, within AO356_01690 at 380.655 kb on - strand, within AO356_01690 at 380.655 kb on - strand, within AO356_01690 at 380.655 kb on - strand, within AO356_01690 at 380.790 kb on - strand at 380.790 kb on - strand at 380.790 kb on - strand at 380.966 kb on - strand, within AO356_01695 at 381.151 kb on + strand, within AO356_01695
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 377,809 + -0.6 377,809 + -2.3 377,810 - +0.0 377,810 - +2.1 377,832 - +0.8 377,838 + +0.9 377,839 - +0.7 378,229 + AO356_01680 0.56 +0.3 378,294 + AO356_01680 0.65 -0.4 378,294 + AO356_01680 0.65 -0.1 378,294 + AO356_01680 0.65 +0.6 378,294 + AO356_01680 0.65 +1.3 378,294 + AO356_01680 0.65 +0.3 378,294 + AO356_01680 0.65 -2.0 378,295 - AO356_01680 0.65 -1.3 378,295 - AO356_01680 0.65 +0.9 378,309 + AO356_01680 0.67 +0.4 378,310 - AO356_01680 0.67 +1.3 378,521 - +1.4 378,543 - -0.3 378,543 - -0.2 378,601 + +0.5 378,601 + +0.3 378,601 + +1.1 378,602 - -0.0 378,602 - +0.1 378,671 - +0.0 378,750 + -0.3 378,751 - -0.7 378,751 - +0.8 378,904 - AO356_01685 0.10 +1.3 379,040 + AO356_01685 0.20 +0.0 379,149 - AO356_01685 0.28 +0.2 379,175 + AO356_01685 0.29 -1.0 379,260 - AO356_01685 0.35 +0.3 379,388 + AO356_01685 0.45 +0.7 379,388 + AO356_01685 0.45 +2.1 379,389 - AO356_01685 0.45 +1.0 379,411 - AO356_01685 0.46 -0.4 379,411 - AO356_01685 0.46 -0.6 379,411 - AO356_01685 0.46 +0.7 379,854 + AO356_01685 0.78 -0.1 379,854 + AO356_01685 0.78 +0.8 379,855 - AO356_01685 0.78 +0.8 379,855 - AO356_01685 0.78 +0.6 379,855 - AO356_01685 0.78 +0.8 379,855 - AO356_01685 0.78 +1.9 379,855 - AO356_01685 0.78 +0.7 380,233 - +0.6 380,233 - -0.3 380,233 - -0.7 380,237 + +0.2 380,237 + +0.3 380,323 + +2.9 380,323 + +0.3 380,323 + +0.1 380,324 - +0.2 380,324 - -1.3 380,582 + AO356_01690 0.53 +0.6 380,583 - AO356_01690 0.53 +0.1 380,654 + AO356_01690 0.66 -0.3 380,654 + AO356_01690 0.66 +0.1 380,654 + AO356_01690 0.66 -0.7 380,654 + AO356_01690 0.66 +0.1 380,655 - AO356_01690 0.66 +0.0 380,655 - AO356_01690 0.66 +0.0 380,655 - AO356_01690 0.66 -1.5 380,790 - -0.2 380,790 - +1.2 380,790 - -1.4 380,966 - AO356_01695 0.13 +0.3 381,151 + AO356_01695 0.33 +1.1
Or see this region's nucleotide sequence