Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS15440 and ABZR87_RS15445 are separated by 22 nucleotides ABZR87_RS15445 and ABZR87_RS15450 are separated by 146 nucleotides
ABZR87_RS15440: ABZR87_RS15440 - ribonuclease G, at 3,248,347 to 3,249,816
_RS15440
ABZR87_RS15445: ABZR87_RS15445 - MFS transporter, at 3,249,839 to 3,251,230
_RS15445
ABZR87_RS15450: ABZR87_RS15450 - 2-dehydropantoate 2-reductase, at 3,251,377 to 3,252,318
_RS15450
Position (kb)
3249
3250
3251
3252 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3248.906 kb on - strand, within ABZR87_RS15440 at 3248.972 kb on - strand, within ABZR87_RS15440 at 3249.121 kb on + strand, within ABZR87_RS15440 at 3249.121 kb on + strand, within ABZR87_RS15440 at 3249.121 kb on + strand, within ABZR87_RS15440 at 3249.151 kb on + strand, within ABZR87_RS15440 at 3249.152 kb on - strand, within ABZR87_RS15440 at 3249.214 kb on + strand, within ABZR87_RS15440 at 3249.272 kb on - strand, within ABZR87_RS15440 at 3249.796 kb on + strand at 3249.815 kb on - strand at 3249.815 kb on - strand at 3249.947 kb on + strand at 3249.948 kb on - strand at 3249.948 kb on - strand at 3250.104 kb on + strand, within ABZR87_RS15445 at 3250.104 kb on + strand, within ABZR87_RS15445 at 3250.104 kb on + strand, within ABZR87_RS15445 at 3250.104 kb on + strand, within ABZR87_RS15445 at 3250.105 kb on - strand, within ABZR87_RS15445 at 3250.119 kb on + strand, within ABZR87_RS15445 at 3250.120 kb on - strand, within ABZR87_RS15445 at 3250.120 kb on - strand, within ABZR87_RS15445 at 3250.120 kb on - strand, within ABZR87_RS15445 at 3250.120 kb on - strand, within ABZR87_RS15445 at 3250.327 kb on - strand, within ABZR87_RS15445 at 3250.355 kb on + strand, within ABZR87_RS15445 at 3250.355 kb on + strand, within ABZR87_RS15445 at 3250.355 kb on + strand, within ABZR87_RS15445 at 3250.407 kb on + strand, within ABZR87_RS15445 at 3250.408 kb on - strand, within ABZR87_RS15445 at 3250.408 kb on - strand, within ABZR87_RS15445 at 3250.704 kb on + strand, within ABZR87_RS15445 at 3250.705 kb on - strand, within ABZR87_RS15445 at 3251.410 kb on + strand at 3251.411 kb on - strand at 3251.425 kb on + strand at 3251.425 kb on + strand at 3251.619 kb on + strand, within ABZR87_RS15450 at 3251.620 kb on - strand, within ABZR87_RS15450 at 3251.690 kb on - strand, within ABZR87_RS15450
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,248,906 - ABZR87_RS15440 0.38 -0.4 3,248,972 - ABZR87_RS15440 0.43 +0.0 3,249,121 + ABZR87_RS15440 0.53 +0.4 3,249,121 + ABZR87_RS15440 0.53 +0.0 3,249,121 + ABZR87_RS15440 0.53 +0.8 3,249,151 + ABZR87_RS15440 0.55 -1.3 3,249,152 - ABZR87_RS15440 0.55 +0.4 3,249,214 + ABZR87_RS15440 0.59 -1.0 3,249,272 - ABZR87_RS15440 0.63 -2.4 3,249,796 + -1.9 3,249,815 - -0.6 3,249,815 - -0.3 3,249,947 + +0.3 3,249,948 - +1.8 3,249,948 - +2.4 3,250,104 + ABZR87_RS15445 0.19 -0.6 3,250,104 + ABZR87_RS15445 0.19 +0.1 3,250,104 + ABZR87_RS15445 0.19 +0.2 3,250,104 + ABZR87_RS15445 0.19 +1.2 3,250,105 - ABZR87_RS15445 0.19 +0.2 3,250,119 + ABZR87_RS15445 0.20 +0.3 3,250,120 - ABZR87_RS15445 0.20 +0.1 3,250,120 - ABZR87_RS15445 0.20 +0.0 3,250,120 - ABZR87_RS15445 0.20 +0.7 3,250,120 - ABZR87_RS15445 0.20 +0.2 3,250,327 - ABZR87_RS15445 0.35 +1.2 3,250,355 + ABZR87_RS15445 0.37 -0.4 3,250,355 + ABZR87_RS15445 0.37 -0.2 3,250,355 + ABZR87_RS15445 0.37 +0.1 3,250,407 + ABZR87_RS15445 0.41 -0.1 3,250,408 - ABZR87_RS15445 0.41 +0.5 3,250,408 - ABZR87_RS15445 0.41 +0.7 3,250,704 + ABZR87_RS15445 0.62 +1.8 3,250,705 - ABZR87_RS15445 0.62 +0.9 3,251,410 + -0.1 3,251,411 - -0.5 3,251,425 + -1.3 3,251,425 + -0.5 3,251,619 + ABZR87_RS15450 0.26 +1.0 3,251,620 - ABZR87_RS15450 0.26 +0.0 3,251,690 - ABZR87_RS15450 0.33 +0.8
Or see this region's nucleotide sequence