Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20683 and SM_b20684 are separated by 134 nucleotides SM_b20684 and SM_b20685 are separated by 37 nucleotides
SM_b20683: SM_b20683 - LysR family transcriptional regulator, at 1,485,370 to 1,486,269
_b20683
SM_b20684: SM_b20684 - hypothetical protein, at 1,486,404 to 1,487,240
_b20684
SM_b20685: SM_b20685 - hypothetical protein, at 1,487,278 to 1,489,734
_b20685
Position (kb)
1486
1487
1488 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1485.467 kb on + strand, within SM_b20683 at 1485.468 kb on - strand, within SM_b20683 at 1485.468 kb on - strand, within SM_b20683 at 1485.594 kb on - strand, within SM_b20683 at 1485.618 kb on + strand, within SM_b20683 at 1485.619 kb on - strand, within SM_b20683 at 1485.622 kb on - strand, within SM_b20683 at 1485.625 kb on + strand, within SM_b20683 at 1485.626 kb on - strand, within SM_b20683 at 1485.659 kb on + strand, within SM_b20683 at 1485.985 kb on + strand, within SM_b20683 at 1485.986 kb on - strand, within SM_b20683 at 1485.986 kb on - strand, within SM_b20683 at 1486.001 kb on - strand, within SM_b20683 at 1486.248 kb on - strand at 1486.261 kb on + strand at 1486.262 kb on - strand at 1486.262 kb on - strand at 1486.317 kb on - strand at 1486.416 kb on + strand at 1486.416 kb on + strand at 1486.420 kb on - strand at 1486.488 kb on + strand, within SM_b20684 at 1486.533 kb on + strand, within SM_b20684 at 1486.534 kb on - strand, within SM_b20684 at 1486.534 kb on - strand, within SM_b20684 at 1486.553 kb on + strand, within SM_b20684 at 1486.553 kb on + strand, within SM_b20684 at 1486.553 kb on + strand, within SM_b20684 at 1486.611 kb on + strand, within SM_b20684 at 1486.611 kb on + strand, within SM_b20684 at 1486.611 kb on + strand, within SM_b20684 at 1486.612 kb on - strand, within SM_b20684 at 1486.612 kb on - strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.613 kb on + strand, within SM_b20684 at 1486.614 kb on - strand, within SM_b20684 at 1486.614 kb on - strand, within SM_b20684 at 1486.833 kb on + strand, within SM_b20684 at 1487.049 kb on + strand, within SM_b20684 at 1487.049 kb on + strand, within SM_b20684 at 1487.049 kb on + strand, within SM_b20684 at 1487.049 kb on + strand, within SM_b20684 at 1487.050 kb on - strand, within SM_b20684 at 1487.115 kb on + strand, within SM_b20684 at 1487.115 kb on + strand, within SM_b20684 at 1487.115 kb on + strand, within SM_b20684 at 1487.116 kb on - strand, within SM_b20684 at 1487.116 kb on - strand, within SM_b20684 at 1487.116 kb on - strand, within SM_b20684 at 1487.116 kb on - strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.117 kb on + strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.118 kb on - strand, within SM_b20684 at 1487.151 kb on + strand, within SM_b20684 at 1487.152 kb on - strand, within SM_b20684 at 1487.152 kb on - strand, within SM_b20684 at 1487.179 kb on - strand at 1487.187 kb on + strand at 1487.187 kb on + strand at 1487.188 kb on - strand at 1487.207 kb on + strand at 1487.302 kb on + strand at 1487.524 kb on + strand, within SM_b20685 at 1487.524 kb on + strand, within SM_b20685 at 1487.525 kb on - strand, within SM_b20685 at 1487.525 kb on - strand, within SM_b20685 at 1487.526 kb on + strand, within SM_b20685 at 1487.527 kb on - strand, within SM_b20685 at 1487.560 kb on + strand, within SM_b20685 at 1488.022 kb on + strand, within SM_b20685 at 1488.098 kb on - strand, within SM_b20685
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 1,485,467 + SM_b20683 0.11 -0.0 1,485,468 - SM_b20683 0.11 +0.4 1,485,468 - SM_b20683 0.11 -0.4 1,485,594 - SM_b20683 0.25 +0.0 1,485,618 + SM_b20683 0.28 -0.1 1,485,619 - SM_b20683 0.28 +0.1 1,485,622 - SM_b20683 0.28 -1.2 1,485,625 + SM_b20683 0.28 -0.7 1,485,626 - SM_b20683 0.28 -0.2 1,485,659 + SM_b20683 0.32 -0.8 1,485,985 + SM_b20683 0.68 -0.7 1,485,986 - SM_b20683 0.68 -0.4 1,485,986 - SM_b20683 0.68 +0.2 1,486,001 - SM_b20683 0.70 +0.1 1,486,248 - +0.1 1,486,261 + -0.1 1,486,262 - +0.5 1,486,262 - -0.7 1,486,317 - +1.2 1,486,416 + +1.2 1,486,416 + +1.7 1,486,420 - +0.7 1,486,488 + SM_b20684 0.10 +0.7 1,486,533 + SM_b20684 0.15 +0.9 1,486,534 - SM_b20684 0.16 +1.1 1,486,534 - SM_b20684 0.16 +0.7 1,486,553 + SM_b20684 0.18 +1.4 1,486,553 + SM_b20684 0.18 +1.0 1,486,553 + SM_b20684 0.18 +1.9 1,486,611 + SM_b20684 0.25 +1.0 1,486,611 + SM_b20684 0.25 -0.7 1,486,611 + SM_b20684 0.25 +1.5 1,486,612 - SM_b20684 0.25 +2.1 1,486,612 - SM_b20684 0.25 +1.8 1,486,613 + SM_b20684 0.25 +0.2 1,486,613 + SM_b20684 0.25 +1.7 1,486,613 + SM_b20684 0.25 +0.9 1,486,613 + SM_b20684 0.25 +1.0 1,486,613 + SM_b20684 0.25 +0.7 1,486,613 + SM_b20684 0.25 +0.7 1,486,613 + SM_b20684 0.25 +1.0 1,486,613 + SM_b20684 0.25 +0.2 1,486,614 - SM_b20684 0.25 +2.0 1,486,614 - SM_b20684 0.25 +1.6 1,486,833 + SM_b20684 0.51 -0.4 1,487,049 + SM_b20684 0.77 +0.3 1,487,049 + SM_b20684 0.77 +1.6 1,487,049 + SM_b20684 0.77 -1.1 1,487,049 + SM_b20684 0.77 +1.5 1,487,050 - SM_b20684 0.77 +1.7 1,487,115 + SM_b20684 0.85 +1.0 1,487,115 + SM_b20684 0.85 +0.8 1,487,115 + SM_b20684 0.85 +2.1 1,487,116 - SM_b20684 0.85 +0.4 1,487,116 - SM_b20684 0.85 +1.1 1,487,116 - SM_b20684 0.85 +0.4 1,487,116 - SM_b20684 0.85 +1.7 1,487,117 + SM_b20684 0.85 +0.5 1,487,117 + SM_b20684 0.85 +2.0 1,487,117 + SM_b20684 0.85 +1.4 1,487,117 + SM_b20684 0.85 +0.5 1,487,117 + SM_b20684 0.85 +0.2 1,487,117 + SM_b20684 0.85 +2.1 1,487,117 + SM_b20684 0.85 +1.3 1,487,117 + SM_b20684 0.85 +1.0 1,487,118 - SM_b20684 0.85 +1.6 1,487,118 - SM_b20684 0.85 +1.2 1,487,118 - SM_b20684 0.85 +1.7 1,487,118 - SM_b20684 0.85 +2.4 1,487,118 - SM_b20684 0.85 +2.5 1,487,118 - SM_b20684 0.85 +1.8 1,487,118 - SM_b20684 0.85 +1.6 1,487,118 - SM_b20684 0.85 +1.1 1,487,118 - SM_b20684 0.85 +1.2 1,487,118 - SM_b20684 0.85 +0.3 1,487,118 - SM_b20684 0.85 +3.8 1,487,151 + SM_b20684 0.89 +1.4 1,487,152 - SM_b20684 0.89 +0.9 1,487,152 - SM_b20684 0.89 +1.2 1,487,179 - +1.2 1,487,187 + +1.5 1,487,187 + +0.5 1,487,188 - +2.0 1,487,207 + +1.0 1,487,302 + -0.2 1,487,524 + SM_b20685 0.10 -1.1 1,487,524 + SM_b20685 0.10 -1.0 1,487,525 - SM_b20685 0.10 -0.3 1,487,525 - SM_b20685 0.10 -0.9 1,487,526 + SM_b20685 0.10 -0.1 1,487,527 - SM_b20685 0.10 +1.0 1,487,560 + SM_b20685 0.11 +0.2 1,488,022 + SM_b20685 0.30 +0.2 1,488,098 - SM_b20685 0.33 +0.1
Or see this region's nucleotide sequence