Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS01450 and RR42_RS01455 are separated by 257 nucleotides RR42_RS01455 and RR42_RS01460 are separated by 120 nucleotides
RR42_RS01450: RR42_RS01450 - hypothetical protein, at 326,030 to 326,896
_RS01450
RR42_RS01455: RR42_RS01455 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, at 327,154 to 328,515
_RS01455
RR42_RS01460: RR42_RS01460 - glucosamine--fructose-6-phosphate aminotransferase, at 328,636 to 330,474
_RS01460
Position (kb)
327
328
329 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 326.257 kb on - strand, within RR42_RS01450 at 326.451 kb on + strand, within RR42_RS01450 at 326.520 kb on + strand, within RR42_RS01450 at 326.690 kb on + strand, within RR42_RS01450 at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.814 kb on + strand at 326.815 kb on - strand at 326.815 kb on - strand at 326.815 kb on - strand at 326.861 kb on + strand at 326.862 kb on - strand at 326.862 kb on - strand at 326.862 kb on - strand at 326.862 kb on - strand at 326.862 kb on - strand at 326.862 kb on - strand at 326.867 kb on + strand at 326.868 kb on + strand at 326.868 kb on - strand at 326.977 kb on + strand at 326.977 kb on + strand at 326.977 kb on + strand at 326.977 kb on + strand at 326.977 kb on + strand at 326.977 kb on + strand at 326.978 kb on - strand at 326.978 kb on - strand at 326.978 kb on - strand at 326.978 kb on - strand at 326.978 kb on - strand at 326.978 kb on - strand at 327.117 kb on + strand at 327.141 kb on + strand at 327.141 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 326,257 - RR42_RS01450 0.26 -0.1 326,451 + RR42_RS01450 0.49 +0.5 326,520 + RR42_RS01450 0.57 +0.0 326,690 + RR42_RS01450 0.76 -2.1 326,814 + +0.0 326,814 + +0.4 326,814 + +0.5 326,814 + +0.1 326,814 + -0.8 326,814 + +0.2 326,814 + +0.7 326,814 + +0.5 326,815 - +0.5 326,815 - -0.8 326,815 - +1.9 326,861 + +1.5 326,862 - +0.3 326,862 - +0.2 326,862 - +0.1 326,862 - +0.1 326,862 - -0.5 326,862 - +0.2 326,867 + -0.0 326,868 + -0.8 326,868 - +0.1 326,977 + -0.5 326,977 + +0.7 326,977 + +0.2 326,977 + +0.1 326,977 + -2.1 326,977 + +1.1 326,978 - +0.5 326,978 - +0.7 326,978 - -1.3 326,978 - +0.0 326,978 - -0.1 326,978 - -0.5 327,117 + -0.1 327,141 + +1.1 327,141 + -0.1
Or see this region's nucleotide sequence