Experiment: R2A with Manganese (II) chloride tetrahydrate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS01035 and LRK54_RS01040 are separated by 29 nucleotides LRK54_RS01040 and LRK54_RS01045 are separated by 158 nucleotides LRK54_RS01045 and LRK54_RS01050 are separated by 132 nucleotides
LRK54_RS01035: LRK54_RS01035 - tRNA pseudouridine(55) synthase TruB, at 230,726 to 231,652
_RS01035
LRK54_RS01040: LRK54_RS01040 - 30S ribosome-binding factor RbfA, at 231,682 to 232,065
_RS01040
LRK54_RS01045: LRK54_RS01045 - translation initiation factor IF-2, at 232,224 to 235,025
_RS01045
LRK54_RS01050: LRK54_RS01050 - transcription termination factor NusA, at 235,158 to 236,663
_RS01050
Position (kb) 232
233
234
235
236 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.237 kb on + strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.238 kb on - strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.270 kb on + strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.271 kb on - strand, within LRK54_RS01035 at 231.292 kb on + strand, within LRK54_RS01035 at 231.293 kb on - strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.423 kb on + strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.424 kb on - strand, within LRK54_RS01035 at 231.672 kb on - strand at 235.056 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Manganese (II) chloride tetrahydrate 6.25 mM remove 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +2.0 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +2.0 231,237 + LRK54_RS01035 0.55 +2.3 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +1.1 231,237 + LRK54_RS01035 0.55 +2.5 231,237 + LRK54_RS01035 0.55 +0.9 231,237 + LRK54_RS01035 0.55 -0.7 231,237 + LRK54_RS01035 0.55 +2.2 231,237 + LRK54_RS01035 0.55 +2.3 231,237 + LRK54_RS01035 0.55 +2.0 231,237 + LRK54_RS01035 0.55 -0.1 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +2.4 231,237 + LRK54_RS01035 0.55 +1.5 231,237 + LRK54_RS01035 0.55 +2.9 231,237 + LRK54_RS01035 0.55 +1.7 231,237 + LRK54_RS01035 0.55 +1.0 231,237 + LRK54_RS01035 0.55 +1.3 231,237 + LRK54_RS01035 0.55 +2.1 231,237 + LRK54_RS01035 0.55 +2.6 231,237 + LRK54_RS01035 0.55 +1.7 231,238 - LRK54_RS01035 0.55 +2.4 231,238 - LRK54_RS01035 0.55 +1.0 231,238 - LRK54_RS01035 0.55 +1.8 231,238 - LRK54_RS01035 0.55 +1.3 231,238 - LRK54_RS01035 0.55 +2.3 231,238 - LRK54_RS01035 0.55 +1.9 231,238 - LRK54_RS01035 0.55 +3.3 231,238 - LRK54_RS01035 0.55 +1.8 231,238 - LRK54_RS01035 0.55 +2.2 231,238 - LRK54_RS01035 0.55 +3.4 231,238 - LRK54_RS01035 0.55 +2.0 231,238 - LRK54_RS01035 0.55 +2.4 231,238 - LRK54_RS01035 0.55 +2.4 231,238 - LRK54_RS01035 0.55 +1.5 231,238 - LRK54_RS01035 0.55 +1.6 231,238 - LRK54_RS01035 0.55 +2.1 231,238 - LRK54_RS01035 0.55 +1.5 231,238 - LRK54_RS01035 0.55 +2.6 231,238 - LRK54_RS01035 0.55 +1.9 231,238 - LRK54_RS01035 0.55 +2.6 231,238 - LRK54_RS01035 0.55 +3.1 231,238 - LRK54_RS01035 0.55 +1.4 231,238 - LRK54_RS01035 0.55 +1.4 231,238 - LRK54_RS01035 0.55 +2.4 231,238 - LRK54_RS01035 0.55 +1.9 231,238 - LRK54_RS01035 0.55 +1.7 231,270 + LRK54_RS01035 0.59 +2.2 231,270 + LRK54_RS01035 0.59 +2.5 231,270 + LRK54_RS01035 0.59 +1.6 231,270 + LRK54_RS01035 0.59 +2.4 231,270 + LRK54_RS01035 0.59 +4.0 231,270 + LRK54_RS01035 0.59 +2.0 231,270 + LRK54_RS01035 0.59 +2.3 231,270 + LRK54_RS01035 0.59 +4.2 231,271 - LRK54_RS01035 0.59 +2.0 231,271 - LRK54_RS01035 0.59 +1.9 231,271 - LRK54_RS01035 0.59 +1.5 231,271 - LRK54_RS01035 0.59 +1.8 231,271 - LRK54_RS01035 0.59 +2.2 231,271 - LRK54_RS01035 0.59 +1.6 231,271 - LRK54_RS01035 0.59 +1.8 231,271 - LRK54_RS01035 0.59 +2.9 231,292 + LRK54_RS01035 0.61 +2.2 231,293 - LRK54_RS01035 0.61 +3.0 231,423 + LRK54_RS01035 0.75 +2.9 231,423 + LRK54_RS01035 0.75 +2.1 231,423 + LRK54_RS01035 0.75 +2.1 231,423 + LRK54_RS01035 0.75 +2.4 231,423 + LRK54_RS01035 0.75 +2.2 231,423 + LRK54_RS01035 0.75 +1.3 231,423 + LRK54_RS01035 0.75 +1.6 231,423 + LRK54_RS01035 0.75 +0.4 231,423 + LRK54_RS01035 0.75 +2.6 231,423 + LRK54_RS01035 0.75 +0.9 231,423 + LRK54_RS01035 0.75 +1.7 231,423 + LRK54_RS01035 0.75 +2.6 231,423 + LRK54_RS01035 0.75 +2.2 231,423 + LRK54_RS01035 0.75 +2.6 231,424 - LRK54_RS01035 0.75 +1.8 231,424 - LRK54_RS01035 0.75 +2.6 231,424 - LRK54_RS01035 0.75 +2.6 231,424 - LRK54_RS01035 0.75 +2.6 231,424 - LRK54_RS01035 0.75 +3.3 231,424 - LRK54_RS01035 0.75 +2.6 231,424 - LRK54_RS01035 0.75 +1.5 231,672 - +1.4 235,056 - -0.6
Or see this region's nucleotide sequence