Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34795
Experiment: Cephalothin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,411,111 | + | -0.2 | |||
3,411,858 | - | -0.3 | |||
3,411,889 | + | -0.1 | |||
3,411,898 | - | -0.0 | |||
3,411,915 | + | +0.4 | |||
3,411,989 | - | +1.5 | |||
3,412,099 | + | BPHYT_RS34800 | 0.22 | +0.3 | |
3,412,099 | + | BPHYT_RS34800 | 0.22 | +0.0 | |
3,412,457 | + | +0.9 | |||
3,412,458 | - | +0.2 | |||
3,412,458 | - | -1.3 | |||
3,412,461 | + | +0.2 | |||
3,412,462 | - | +1.5 | |||
3,412,462 | - | +0.6 | |||
3,412,462 | - | -0.2 | |||
3,412,462 | - | +0.9 | |||
3,412,491 | - | +0.7 | |||
3,412,610 | - | -0.2 | |||
3,412,610 | - | -0.0 | |||
3,412,610 | - | +0.3 | |||
3,412,613 | + | -0.6 | |||
3,412,614 | - | +0.1 | |||
3,412,614 | - | +0.5 | |||
3,412,614 | - | -0.5 | |||
3,412,614 | - | -0.4 |
Or see this region's nucleotide sequence