Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29740

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,224,217	+		BPHYT_RS29735	0.38	-0.3
2,224,392	-		BPHYT_RS29735	0.63	+0.1
2,224,544	+		BPHYT_RS29735	0.85	-0.9
2,224,545	-		BPHYT_RS29735	0.85	-0.0
2,224,550	+		BPHYT_RS29735	0.86	+0.3
2,224,550	+		BPHYT_RS29735	0.86	+1.1
2,224,551	-		BPHYT_RS29735	0.86	+0.4
2,224,613	+				+0.1
2,224,649	+				-0.9
2,224,677	-				-0.2
2,224,759	-				+0.0
2,224,759	-				+0.2
2,224,759	-				-0.2
2,224,769	+				+0.2
2,224,770	-				+0.5
2,224,829	-				-0.1
2,225,357	-		BPHYT_RS29740	0.39	-0.3
2,225,360	-		BPHYT_RS29740	0.40	-0.6
2,225,472	-		BPHYT_RS29740	0.50	-1.3
2,225,732	+		BPHYT_RS29740	0.74	-0.3
2,225,869	+		BPHYT_RS29740	0.87	-1.5
2,225,870	-		BPHYT_RS29740	0.87	+0.5
2,226,460	+		BPHYT_RS29745	0.38	-0.1
2,226,673	+		BPHYT_RS29745	0.56	-1.3