Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS21905
Experiment: Cephalothin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 472,179 | + | BPHYT_RS21900 | 0.18 | +0.2 | |
| 472,180 | - | BPHYT_RS21900 | 0.18 | +0.4 | |
| 472,180 | - | BPHYT_RS21900 | 0.18 | +0.0 | |
| 472,519 | + | BPHYT_RS21900 | 0.56 | +0.0 | |
| 472,646 | - | BPHYT_RS21900 | 0.70 | +0.0 | |
| 473,697 | + | BPHYT_RS21905 | 0.80 | -1.3 | |
| 474,212 | + | BPHYT_RS21910 | 0.38 | +0.3 | |
| 474,213 | - | BPHYT_RS21910 | 0.39 | -0.1 | |
| 474,485 | + | BPHYT_RS21910 | 0.75 | -0.0 | |
| 474,738 | - | +0.1 |
Or see this region's nucleotide sequence