Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16215

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
3,679,489	+		BPHYT_RS16210	0.46	-0.2
3,679,592	-		BPHYT_RS16210	0.53	-1.1
3,679,984	+		BPHYT_RS16210	0.79	-0.4
3,680,043	-		BPHYT_RS16210	0.83	+0.3
3,680,233	-				-0.4
3,680,365	-				-0.6
3,680,376	-				-0.1
3,680,410	-				+0.8
3,680,419	+				-0.2
3,680,430	+				+0.0
3,680,430	+				+0.2
3,680,431	-				+0.5
3,680,440	+				+0.5
3,680,616	-		BPHYT_RS16215	0.12	-0.4
3,680,776	+		BPHYT_RS16215	0.24	-2.9
3,680,777	-		BPHYT_RS16215	0.24	-0.8
3,681,346	-		BPHYT_RS16215	0.68	-1.9
3,681,518	+		BPHYT_RS16215	0.81	-1.1
3,681,518	+		BPHYT_RS16215	0.81	-0.5
3,681,519	-		BPHYT_RS16215	0.81	-2.1
3,681,789	+				-1.1
3,681,789	+				+0.5
3,681,852	+		BPHYT_RS16220	0.13	-1.4
3,682,137	+		BPHYT_RS16220	0.56	-0.6
3,682,415	+				-0.2
3,682,467	+				+0.6
3,682,694	+				+0.4
3,682,694	+				+0.4
3,682,694	+				-0.6
3,682,694	+				-0.3
3,682,694	+				+0.3
3,682,695	-				+0.0
3,682,695	-				+0.1
3,682,695	-				-1.0
3,682,695	-				+0.1
3,682,695	-				+0.2
3,682,695	-				+0.9
3,682,695	-				-1.0
3,682,695	-				+0.5
3,682,695	-				-0.2
3,682,695	-				-0.7
3,682,695	-				+0.2
3,682,698	+				-2.9
3,682,698	+				-0.5
3,682,698	+				-0.1
3,682,698	+				-0.5
3,682,698	+				-0.1
3,682,698	+				+0.7
3,682,698	+				-0.3
3,682,698	+				+0.2
3,682,699	-				-0.5
3,682,699	-				-0.1
3,682,699	-				-0.2
3,682,699	-				+0.5
3,682,699	-				-0.9
3,682,699	-				-0.1