Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12060

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,748,752	+		BPHYT_RS12055	0.81	-0.4
2,748,753	-		BPHYT_RS12055	0.81	+0.7
2,748,753	-		BPHYT_RS12055	0.81	+0.1
2,748,753	-		BPHYT_RS12055	0.81	-0.6
2,749,165	+				+1.7
2,749,165	+				-0.3
2,749,165	+				+0.5
2,749,166	-				-0.1
2,749,166	-				-0.7
2,749,166	-				-0.4
2,749,166	-				-0.4
2,749,166	-				+0.1
2,749,166	-				+0.0
2,749,169	+				+1.4
2,749,169	+				-0.2
2,749,170	-				+0.0
2,749,170	-				-0.2
2,749,170	-				+2.4
2,749,170	-				-0.3
2,749,170	-				+0.2
2,749,170	-				-0.2
2,749,170	-				+0.0
2,749,170	-				-0.1
2,749,176	+				-0.2
2,749,206	+				+0.1
2,749,206	+				-0.0
2,749,206	+				-0.4
2,749,207	-				-0.1
2,749,207	-				-0.1
2,749,207	-				+0.0
2,749,207	-				+0.5
2,749,207	-				-1.1
2,749,279	+				+1.0
2,749,353	+				-0.3
2,749,483	-				+0.3
2,749,487	+				-0.3
2,749,734	+				+0.8
2,750,078	+		BPHYT_RS12060	0.44	-1.4
2,750,078	+		BPHYT_RS12060	0.44	+0.3
2,750,521	+				-0.4
2,750,522	-				-0.5
2,750,531	+				+0.1
2,751,120	+		BPHYT_RS12065	0.54	+0.6
2,751,120	+		BPHYT_RS12065	0.54	+1.0
2,751,121	-		BPHYT_RS12065	0.54	-0.3
2,751,404	+				-0.2
2,751,404	+				+0.6
2,751,404	+				-0.0
2,751,404	+				-0.3
2,751,448	+				+0.2
2,751,449	-				-0.1
2,751,535	+				+0.0
2,751,536	-				-0.0