Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08765

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
1,987,295	+				-0.2
1,987,352	+				-0.1
1,987,352	+				-0.4
1,987,353	-				-0.0
1,987,541	+		BPHYT_RS08760	0.30	-0.3
1,987,820	+		BPHYT_RS08760	0.64	-0.1
1,987,821	-		BPHYT_RS08760	0.64	-1.6
1,987,888	-		BPHYT_RS08760	0.72	+0.1
1,987,950	-		BPHYT_RS08760	0.79	-1.8
1,988,012	+		BPHYT_RS08760	0.87	-0.2
1,988,012	+		BPHYT_RS08760	0.87	+0.5
1,988,012	+		BPHYT_RS08760	0.87	-0.3
1,988,105	+				-0.6
1,988,292	-				+1.2
1,988,443	+		BPHYT_RS08765	0.24	-1.0
1,989,095	+				-0.0
1,989,096	-				-0.8
1,989,198	+				-0.1
1,989,198	+				+0.2
1,989,204	-				+0.1
1,989,204	-				-0.1
1,989,309	+				+0.2
1,989,309	+				+0.5
1,989,321	-				+2.3
1,989,363	+				+0.1
1,989,458	-				+1.3
1,989,509	+		BPHYT_RS08770	0.13	-0.1
1,989,510	-		BPHYT_RS08770	0.13	+1.0
1,989,917	+				-0.3
1,989,918	-				+0.0
1,989,995	-				-0.8
1,990,111	+				+0.6