Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07025

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
1,587,435	-		BPHYT_RS07020	0.35	+0.3
1,587,544	+		BPHYT_RS07020	0.44	-0.3
1,587,545	-		BPHYT_RS07020	0.44	-0.1
1,587,545	-		BPHYT_RS07020	0.44	-0.8
1,587,545	-		BPHYT_RS07020	0.44	-0.1
1,587,729	-		BPHYT_RS07020	0.60	+0.6
1,587,992	-		BPHYT_RS07020	0.84	-0.9
1,587,992	-		BPHYT_RS07020	0.84	+0.2
1,587,992	-		BPHYT_RS07020	0.84	+0.3
1,587,992	-		BPHYT_RS07020	0.84	-0.0
1,588,067	-				+0.1
1,588,080	-				-0.5
1,588,340	-				-0.6
1,588,439	+		BPHYT_RS07025	0.11	-0.1
1,588,440	-		BPHYT_RS07025	0.11	+0.2
1,588,541	+		BPHYT_RS07025	0.19	+0.1
1,588,599	+		BPHYT_RS07025	0.24	-0.5
1,588,600	-		BPHYT_RS07025	0.24	+1.9
1,588,600	-		BPHYT_RS07025	0.24	+0.4
1,588,646	+		BPHYT_RS07025	0.28	-0.1
1,588,647	-		BPHYT_RS07025	0.28	+0.3
1,590,505	+				+0.3
1,590,508	+				-0.2