Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS01635
Experiment: Cephalothin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
371,199 | - | BPHYT_RS01630 | 0.80 | -0.7 | |
371,695 | - | BPHYT_RS01635 | 0.40 | -2.0 | |
372,016 | - | +0.8 | |||
372,016 | - | -0.2 | |||
372,064 | - | -0.2 | |||
372,147 | + | -1.1 | |||
372,170 | - | -1.6 | |||
372,191 | + | -1.4 | |||
372,192 | - | +0.1 | |||
372,295 | + | -0.5 | |||
372,296 | - | -0.2 | |||
372,304 | + | -0.2 | |||
372,305 | - | -0.3 | |||
372,371 | + | +2.8 | |||
372,371 | + | -1.2 | |||
372,372 | - | -0.7 | |||
372,399 | - | -0.4 | |||
372,399 | - | -0.4 | |||
372,948 | - | +0.0 | |||
372,948 | - | -0.2 | |||
372,952 | - | +1.2 | |||
372,952 | - | +0.2 | |||
372,952 | - | -0.9 |
Or see this region's nucleotide sequence