Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29200 and AO356_29205 are separated by 444 nucleotides AO356_29205 and AO356_29210 are separated by 75 nucleotides
AO356_29200: AO356_29200 - sugar ABC transporter substrate-binding protein, at 6,789,996 to 6,791,015
_29200
AO356_29205: AO356_29205 - hypothetical protein, at 6,791,460 to 6,792,710
_29205
AO356_29210: AO356_29210 - AAA family ATPase, at 6,792,786 to 6,794,777
_29210
Position (kb)
6791
6792
6793 Strain fitness (log2 ratio)
-1
0
1 at 6790.513 kb on + strand, within AO356_29200 at 6790.513 kb on + strand, within AO356_29200 at 6791.057 kb on - strand at 6791.179 kb on + strand at 6791.180 kb on - strand at 6791.180 kb on - strand at 6791.180 kb on - strand at 6791.180 kb on - strand at 6791.274 kb on + strand at 6791.275 kb on - strand at 6791.275 kb on - strand at 6791.275 kb on - strand at 6791.286 kb on - strand at 6791.430 kb on - strand at 6791.430 kb on - strand at 6791.430 kb on - strand at 6791.542 kb on - strand at 6791.668 kb on - strand, within AO356_29205 at 6791.767 kb on - strand, within AO356_29205 at 6791.845 kb on - strand, within AO356_29205 at 6791.845 kb on - strand, within AO356_29205 at 6791.845 kb on - strand, within AO356_29205 at 6791.880 kb on + strand, within AO356_29205 at 6791.880 kb on + strand, within AO356_29205 at 6791.880 kb on + strand, within AO356_29205 at 6791.881 kb on - strand, within AO356_29205 at 6792.288 kb on + strand, within AO356_29205 at 6792.317 kb on + strand, within AO356_29205 at 6792.317 kb on + strand, within AO356_29205 at 6792.317 kb on + strand, within AO356_29205 at 6792.318 kb on - strand, within AO356_29205 at 6792.350 kb on + strand, within AO356_29205 at 6792.350 kb on + strand, within AO356_29205 at 6792.472 kb on + strand, within AO356_29205 at 6792.472 kb on + strand, within AO356_29205 at 6792.546 kb on + strand, within AO356_29205 at 6792.547 kb on - strand, within AO356_29205 at 6792.667 kb on - strand at 6792.719 kb on - strand at 6792.719 kb on - strand at 6792.835 kb on + strand at 6792.836 kb on - strand at 6792.836 kb on - strand at 6792.969 kb on + strand at 6793.261 kb on + strand, within AO356_29210 at 6793.261 kb on + strand, within AO356_29210 at 6793.262 kb on - strand, within AO356_29210 at 6793.262 kb on - strand, within AO356_29210
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 6,790,513 + AO356_29200 0.51 +1.1 6,790,513 + AO356_29200 0.51 +1.0 6,791,057 - -0.7 6,791,179 + +0.1 6,791,180 - +0.1 6,791,180 - -0.9 6,791,180 - -0.6 6,791,180 - +1.2 6,791,274 + +0.2 6,791,275 - +1.1 6,791,275 - -0.7 6,791,275 - -0.7 6,791,286 - -0.6 6,791,430 - +0.5 6,791,430 - -0.0 6,791,430 - +0.7 6,791,542 - -1.5 6,791,668 - AO356_29205 0.17 -0.2 6,791,767 - AO356_29205 0.25 +0.1 6,791,845 - AO356_29205 0.31 -0.2 6,791,845 - AO356_29205 0.31 +0.5 6,791,845 - AO356_29205 0.31 +0.4 6,791,880 + AO356_29205 0.34 +1.4 6,791,880 + AO356_29205 0.34 -1.1 6,791,880 + AO356_29205 0.34 +0.7 6,791,881 - AO356_29205 0.34 +0.0 6,792,288 + AO356_29205 0.66 +0.2 6,792,317 + AO356_29205 0.69 -0.9 6,792,317 + AO356_29205 0.69 -0.1 6,792,317 + AO356_29205 0.69 -0.9 6,792,318 - AO356_29205 0.69 +0.2 6,792,350 + AO356_29205 0.71 +0.3 6,792,350 + AO356_29205 0.71 +0.5 6,792,472 + AO356_29205 0.81 +0.4 6,792,472 + AO356_29205 0.81 +0.3 6,792,546 + AO356_29205 0.87 +0.2 6,792,547 - AO356_29205 0.87 -1.1 6,792,667 - -0.2 6,792,719 - -0.4 6,792,719 - +1.5 6,792,835 + +0.6 6,792,836 - +0.2 6,792,836 - -1.1 6,792,969 + +0.1 6,793,261 + AO356_29210 0.24 -0.1 6,793,261 + AO356_29210 0.24 +1.1 6,793,262 - AO356_29210 0.24 -0.3 6,793,262 - AO356_29210 0.24 +0.7
Or see this region's nucleotide sequence