Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29075
Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,759,973 | + | AO356_29070 | 0.38 | +0.7 | |
6,759,974 | - | AO356_29070 | 0.38 | -0.7 | |
6,760,479 | + | AO356_29070 | 0.72 | +0.9 | |
6,760,799 | - | +1.4 | |||
6,760,840 | + | +0.5 | |||
6,760,841 | - | +0.5 | |||
6,760,876 | - | -0.2 | |||
6,760,876 | - | +0.4 | |||
6,760,876 | - | +0.8 | |||
6,761,066 | + | AO356_29075 | 0.16 | +1.8 | |
6,761,108 | + | AO356_29075 | 0.20 | -0.2 | |
6,761,337 | - | AO356_29075 | 0.43 | +0.1 | |
6,761,531 | + | AO356_29075 | 0.62 | +2.4 | |
6,761,531 | + | AO356_29075 | 0.62 | +1.2 | |
6,761,531 | + | AO356_29075 | 0.62 | -0.5 | |
6,761,947 | + | -0.7 | |||
6,762,014 | - | +0.6 | |||
6,762,209 | + | AO356_29080 | 0.26 | +1.3 | |
6,762,506 | + | AO356_29080 | 0.55 | -0.2 | |
6,762,506 | + | AO356_29080 | 0.55 | -1.5 | |
6,762,691 | + | AO356_29080 | 0.74 | -1.3 | |
6,762,740 | + | AO356_29080 | 0.79 | -0.3 |
Or see this region's nucleotide sequence