Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28340
Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,589,714 | - | AO356_28335 | 0.66 | +0.3 | |
6,590,175 | + | +0.1 | |||
6,590,176 | - | +0.5 | |||
6,590,438 | + | +0.9 | |||
6,590,439 | - | +0.7 | |||
6,590,700 | - | +0.7 | |||
6,590,872 | + | AO356_28340 | 0.19 | -0.1 | |
6,591,058 | + | AO356_28340 | 0.32 | +1.4 | |
6,591,079 | + | AO356_28340 | 0.34 | +0.5 | |
6,591,080 | - | AO356_28340 | 0.34 | +0.1 | |
6,591,125 | + | AO356_28340 | 0.37 | -0.5 | |
6,591,126 | - | AO356_28340 | 0.37 | +0.7 | |
6,591,250 | + | AO356_28340 | 0.46 | +0.4 | |
6,591,557 | - | AO356_28340 | 0.68 | +0.5 | |
6,591,557 | - | AO356_28340 | 0.68 | +0.1 | |
6,591,651 | + | AO356_28340 | 0.75 | -0.3 | |
6,591,652 | - | AO356_28340 | 0.75 | +1.4 | |
6,591,706 | + | AO356_28340 | 0.78 | -1.5 | |
6,591,757 | + | AO356_28340 | 0.82 | -0.2 | |
6,591,757 | + | AO356_28340 | 0.82 | +0.8 | |
6,591,847 | + | AO356_28340 | 0.89 | +0.8 | |
6,592,014 | + | +0.7 | |||
6,592,015 | - | -1.7 | |||
6,592,273 | + | -0.0 | |||
6,592,274 | - | -0.6 | |||
6,592,274 | - | -0.4 | |||
6,592,299 | + | +0.4 | |||
6,592,343 | - | -0.5 | |||
6,592,343 | - | +0.7 | |||
6,592,494 | + | +0.5 | |||
6,592,663 | - | AO356_28345 | 0.25 | +0.7 | |
6,592,963 | + | AO356_28345 | 0.74 | +2.2 |
Or see this region's nucleotide sequence