Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26970 and AO356_26975 are separated by 12 nucleotides AO356_26975 and AO356_26980 are separated by 153 nucleotides AO356_26980 and AO356_26985 are separated by 121 nucleotides
AO356_26970: AO356_26970 - sodium:proton antiporter, at 6,141,704 to 6,143,041
_26970
AO356_26975: AO356_26975 - hypothetical protein, at 6,143,054 to 6,143,590
_26975
AO356_26980: AO356_26980 - amino acid transporter, at 6,143,744 to 6,143,974
_26980
AO356_26985: AO356_26985 - histidine kinase, at 6,144,096 to 6,146,024
_26985
Position (kb)
6143
6144 Strain fitness (log2 ratio)
-1
0
1
2
3 at 6142.397 kb on + strand, within AO356_26970 at 6142.398 kb on - strand, within AO356_26970 at 6142.428 kb on - strand, within AO356_26970 at 6142.886 kb on + strand, within AO356_26970 at 6142.887 kb on - strand, within AO356_26970 at 6142.887 kb on - strand, within AO356_26970 at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.015 kb on + strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.016 kb on - strand at 6143.082 kb on + strand at 6143.082 kb on + strand at 6143.083 kb on - strand at 6143.083 kb on - strand at 6143.083 kb on - strand at 6143.442 kb on + strand, within AO356_26975 at 6143.443 kb on - strand, within AO356_26975 at 6143.479 kb on - strand, within AO356_26975 at 6143.496 kb on + strand, within AO356_26975 at 6143.496 kb on + strand, within AO356_26975 at 6143.497 kb on - strand, within AO356_26975 at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.717 kb on - strand at 6143.722 kb on + strand at 6143.854 kb on + strand, within AO356_26980 at 6143.866 kb on + strand, within AO356_26980 at 6143.866 kb on + strand, within AO356_26980 at 6143.867 kb on - strand, within AO356_26980 at 6143.894 kb on - strand, within AO356_26980 at 6143.903 kb on + strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.904 kb on - strand, within AO356_26980 at 6143.972 kb on + strand at 6144.042 kb on + strand at 6144.097 kb on + strand at 6144.097 kb on + strand at 6144.097 kb on + strand at 6144.098 kb on - strand at 6144.197 kb on - strand at 6144.322 kb on + strand, within AO356_26985 at 6144.323 kb on - strand, within AO356_26985 at 6144.405 kb on + strand, within AO356_26985 at 6144.552 kb on + strand, within AO356_26985
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 6,142,397 + AO356_26970 0.52 -0.5 6,142,398 - AO356_26970 0.52 -0.2 6,142,428 - AO356_26970 0.54 +0.7 6,142,886 + AO356_26970 0.88 +2.0 6,142,887 - AO356_26970 0.88 +0.4 6,142,887 - AO356_26970 0.88 +2.0 6,143,015 + +2.6 6,143,015 + -0.3 6,143,015 + -0.5 6,143,015 + +0.0 6,143,016 - +0.6 6,143,016 - +0.2 6,143,016 - -0.4 6,143,016 - -1.4 6,143,016 - -0.3 6,143,082 + +2.9 6,143,082 + +1.3 6,143,083 - -0.2 6,143,083 - -0.7 6,143,083 - +0.7 6,143,442 + AO356_26975 0.72 +0.2 6,143,443 - AO356_26975 0.72 -1.0 6,143,479 - AO356_26975 0.79 +2.0 6,143,496 + AO356_26975 0.82 +0.4 6,143,496 + AO356_26975 0.82 +0.5 6,143,497 - AO356_26975 0.82 +0.5 6,143,717 - +0.2 6,143,717 - -1.3 6,143,717 - -0.8 6,143,717 - -1.4 6,143,722 + +0.6 6,143,854 + AO356_26980 0.48 -0.3 6,143,866 + AO356_26980 0.53 +1.6 6,143,866 + AO356_26980 0.53 -1.0 6,143,867 - AO356_26980 0.53 -0.1 6,143,894 - AO356_26980 0.65 -0.4 6,143,903 + AO356_26980 0.69 +0.2 6,143,904 - AO356_26980 0.69 +0.5 6,143,904 - AO356_26980 0.69 +0.3 6,143,904 - AO356_26980 0.69 -0.2 6,143,904 - AO356_26980 0.69 +0.3 6,143,972 + +0.4 6,144,042 + +0.7 6,144,097 + +0.2 6,144,097 + -1.0 6,144,097 + -0.7 6,144,098 - +0.2 6,144,197 - +2.9 6,144,322 + AO356_26985 0.12 +0.0 6,144,323 - AO356_26985 0.12 -0.5 6,144,405 + AO356_26985 0.16 -0.8 6,144,552 + AO356_26985 0.24 +0.0
Or see this region's nucleotide sequence