Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25690
Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,809,519 | - | -0.1 | |||
5,809,682 | - | +0.6 | |||
5,809,721 | + | -1.7 | |||
5,809,722 | - | +0.8 | |||
5,809,967 | + | AO356_25690 | 0.20 | +0.5 | |
5,809,980 | - | AO356_25690 | 0.21 | +0.7 | |
5,810,469 | + | AO356_25690 | 0.48 | -0.9 | |
5,810,470 | - | AO356_25690 | 0.48 | -0.7 | |
5,810,738 | + | AO356_25690 | 0.63 | +0.4 | |
5,811,372 | + | -0.3 | |||
5,811,381 | - | -0.4 | |||
5,811,381 | - | +0.6 | |||
5,811,466 | + | +0.3 | |||
5,811,495 | - | -0.2 | |||
5,811,538 | + | +0.1 | |||
5,811,539 | - | -0.4 | |||
5,811,634 | - | +0.4 | |||
5,811,772 | + | -0.0 | |||
5,811,773 | - | +1.1 | |||
5,811,810 | + | +1.4 | |||
5,811,811 | - | +1.6 | |||
5,812,172 | + | AO356_25695 | 0.26 | +0.5 | |
5,812,272 | - | AO356_25695 | 0.31 | -0.4 | |
5,812,284 | - | AO356_25695 | 0.32 | -0.9 | |
5,812,284 | - | AO356_25695 | 0.32 | -1.3 | |
5,812,358 | + | AO356_25695 | 0.35 | +0.2 | |
5,812,359 | - | AO356_25695 | 0.35 | +0.1 | |
5,812,359 | - | AO356_25695 | 0.35 | +0.6 | |
5,812,373 | + | AO356_25695 | 0.36 | -0.3 | |
5,812,374 | - | AO356_25695 | 0.36 | -0.5 |
Or see this region's nucleotide sequence