Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25685

Experiment: Paraquat dichloride 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_25680 and AO356_25685 are separated by 15 nucleotidesAO356_25685 and AO356_25690 are separated by 319 nucleotides AO356_25680: AO356_25680 - carbon starvation protein A, at 5,807,013 to 5,809,073 _25680 AO356_25685: AO356_25685 - hypothetical protein, at 5,809,089 to 5,809,286 _25685 AO356_25690: AO356_25690 - chemotaxis protein, at 5,809,606 to 5,811,402 _25690 Position (kb) 5809 5810Strain fitness (log2 ratio) -1 0 1at 5809.519 kb on - strandat 5809.682 kb on - strandat 5809.721 kb on + strandat 5809.722 kb on - strandat 5809.967 kb on + strand, within AO356_25690at 5809.980 kb on - strand, within AO356_25690

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml
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5,809,519 - -0.1
5,809,682 - +0.6
5,809,721 + -1.7
5,809,722 - +0.8
5,809,967 + AO356_25690 0.20 +0.5
5,809,980 - AO356_25690 0.21 +0.7

Or see this region's nucleotide sequence