Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25675 and AO356_25680 are separated by 325 nucleotides AO356_25680 and AO356_25685 are separated by 15 nucleotides AO356_25685 and AO356_25690 are separated by 319 nucleotides
AO356_25675: AO356_25675 - histidine kinase, at 5,805,326 to 5,806,687
_25675
AO356_25680: AO356_25680 - carbon starvation protein A, at 5,807,013 to 5,809,073
_25680
AO356_25685: AO356_25685 - hypothetical protein, at 5,809,089 to 5,809,286
_25685
AO356_25690: AO356_25690 - chemotaxis protein, at 5,809,606 to 5,811,402
_25690
Position (kb)
5807
5808
5809
5810 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5806.200 kb on + strand, within AO356_25675 at 5806.200 kb on + strand, within AO356_25675 at 5806.201 kb on - strand, within AO356_25675 at 5806.248 kb on + strand, within AO356_25675 at 5806.335 kb on + strand, within AO356_25675 at 5806.335 kb on + strand, within AO356_25675 at 5806.336 kb on - strand, within AO356_25675 at 5806.336 kb on - strand, within AO356_25675 at 5806.336 kb on - strand, within AO356_25675 at 5806.336 kb on - strand, within AO356_25675 at 5806.404 kb on + strand, within AO356_25675 at 5806.405 kb on - strand, within AO356_25675 at 5806.521 kb on + strand, within AO356_25675 at 5806.521 kb on + strand, within AO356_25675 at 5806.521 kb on + strand, within AO356_25675 at 5806.521 kb on + strand, within AO356_25675 at 5806.522 kb on - strand, within AO356_25675 at 5806.522 kb on - strand, within AO356_25675 at 5806.522 kb on - strand, within AO356_25675 at 5806.691 kb on + strand at 5806.691 kb on + strand at 5806.733 kb on + strand at 5806.733 kb on + strand at 5806.733 kb on + strand at 5806.734 kb on - strand at 5806.757 kb on + strand at 5806.758 kb on - strand at 5806.867 kb on + strand at 5806.871 kb on + strand at 5806.871 kb on + strand at 5806.871 kb on + strand at 5806.872 kb on - strand at 5806.872 kb on - strand at 5806.877 kb on + strand at 5806.877 kb on + strand at 5806.878 kb on - strand at 5806.878 kb on - strand at 5806.881 kb on + strand at 5806.881 kb on + strand at 5806.882 kb on - strand at 5806.882 kb on - strand at 5806.892 kb on + strand at 5806.892 kb on + strand at 5806.893 kb on - strand at 5806.893 kb on - strand at 5806.893 kb on - strand at 5806.893 kb on - strand at 5806.893 kb on - strand at 5806.893 kb on - strand at 5806.896 kb on + strand at 5806.897 kb on - strand at 5806.897 kb on - strand at 5806.899 kb on + strand at 5806.900 kb on - strand at 5806.911 kb on - strand at 5806.911 kb on - strand at 5806.966 kb on - strand at 5806.966 kb on - strand at 5809.519 kb on - strand at 5809.682 kb on - strand at 5809.721 kb on + strand at 5809.722 kb on - strand at 5809.967 kb on + strand, within AO356_25690 at 5809.980 kb on - strand, within AO356_25690
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 5,806,200 + AO356_25675 0.64 -1.2 5,806,200 + AO356_25675 0.64 +0.5 5,806,201 - AO356_25675 0.64 +0.6 5,806,248 + AO356_25675 0.68 -1.3 5,806,335 + AO356_25675 0.74 -0.7 5,806,335 + AO356_25675 0.74 -0.9 5,806,336 - AO356_25675 0.74 -0.9 5,806,336 - AO356_25675 0.74 -0.2 5,806,336 - AO356_25675 0.74 +0.1 5,806,336 - AO356_25675 0.74 +0.2 5,806,404 + AO356_25675 0.79 +0.8 5,806,405 - AO356_25675 0.79 +0.4 5,806,521 + AO356_25675 0.88 -0.9 5,806,521 + AO356_25675 0.88 -0.1 5,806,521 + AO356_25675 0.88 +0.1 5,806,521 + AO356_25675 0.88 +0.4 5,806,522 - AO356_25675 0.88 -0.3 5,806,522 - AO356_25675 0.88 +0.9 5,806,522 - AO356_25675 0.88 -0.7 5,806,691 + +0.1 5,806,691 + -0.5 5,806,733 + +0.5 5,806,733 + -1.3 5,806,733 + +0.5 5,806,734 - -0.7 5,806,757 + +0.2 5,806,758 - +0.3 5,806,867 + +0.7 5,806,871 + -0.4 5,806,871 + -0.3 5,806,871 + -0.2 5,806,872 - -0.4 5,806,872 - -0.0 5,806,877 + +1.3 5,806,877 + +0.9 5,806,878 - -2.1 5,806,878 - -1.1 5,806,881 + +2.4 5,806,881 + -1.2 5,806,882 - +0.1 5,806,882 - +0.2 5,806,892 + +0.5 5,806,892 + +1.1 5,806,893 - -0.3 5,806,893 - -0.9 5,806,893 - -0.6 5,806,893 - -1.5 5,806,893 - -1.8 5,806,893 - -0.4 5,806,896 + -1.1 5,806,897 - +0.7 5,806,897 - -0.7 5,806,899 + +1.1 5,806,900 - +1.4 5,806,911 - -0.1 5,806,911 - -1.5 5,806,966 - +0.6 5,806,966 - -1.2 5,809,519 - -0.1 5,809,682 - +0.6 5,809,721 + -1.7 5,809,722 - +0.8 5,809,967 + AO356_25690 0.20 +0.5 5,809,980 - AO356_25690 0.21 +0.7
Or see this region's nucleotide sequence