Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24265 and AO356_24270 are separated by 58 nucleotides AO356_24270 and AO356_24275 are separated by 111 nucleotides
AO356_24265: AO356_24265 - non-ribosomal peptide synthetase, at 5,457,036 to 5,470,982
_24265
AO356_24270: AO356_24270 - non-ribosomal peptide synthetase, at 5,471,041 to 5,474,103
_24270
AO356_24275: AO356_24275 - taurine catabolism dioxygenase TauD, at 5,474,215 to 5,475,261
_24275
Position (kb) 5471
5472
5473
5474
5475 Strain fitness (log2 ratio) -2
-1
0
1 at 5470.421 kb on - strand at 5470.561 kb on + strand at 5471.486 kb on + strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.487 kb on - strand, within AO356_24270 at 5471.561 kb on + strand, within AO356_24270 at 5471.562 kb on - strand, within AO356_24270 at 5471.751 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.966 kb on + strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5471.967 kb on - strand, within AO356_24270 at 5472.140 kb on + strand, within AO356_24270 at 5472.141 kb on - strand, within AO356_24270 at 5472.336 kb on - strand, within AO356_24270 at 5472.336 kb on - strand, within AO356_24270 at 5472.422 kb on + strand, within AO356_24270 at 5472.423 kb on - strand, within AO356_24270 at 5472.423 kb on - strand, within AO356_24270 at 5472.431 kb on + strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.591 kb on - strand, within AO356_24270 at 5472.632 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.181 kb on + strand, within AO356_24270 at 5473.182 kb on - strand, within AO356_24270 at 5473.184 kb on + strand, within AO356_24270 at 5473.222 kb on + strand, within AO356_24270 at 5473.757 kb on + strand, within AO356_24270 at 5473.757 kb on + strand, within AO356_24270 at 5473.829 kb on + strand at 5474.423 kb on + strand, within AO356_24275 at 5474.423 kb on + strand, within AO356_24275 at 5474.831 kb on + strand, within AO356_24275 at 5474.865 kb on - strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.921 kb on + strand, within AO356_24275 at 5474.922 kb on - strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.925 kb on + strand, within AO356_24275 at 5474.966 kb on + strand, within AO356_24275 at 5474.966 kb on + strand, within AO356_24275 at 5474.967 kb on - strand, within AO356_24275
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 5,470,421 - +0.5 5,470,561 + -0.4 5,471,486 + AO356_24270 0.15 +0.4 5,471,487 - AO356_24270 0.15 -0.2 5,471,487 - AO356_24270 0.15 +1.1 5,471,487 - AO356_24270 0.15 +1.1 5,471,561 + AO356_24270 0.17 +0.8 5,471,562 - AO356_24270 0.17 +0.9 5,471,751 + AO356_24270 0.23 +1.3 5,471,966 + AO356_24270 0.30 +0.6 5,471,966 + AO356_24270 0.30 +0.4 5,471,966 + AO356_24270 0.30 +0.8 5,471,967 - AO356_24270 0.30 -0.7 5,471,967 - AO356_24270 0.30 -1.5 5,471,967 - AO356_24270 0.30 -2.2 5,471,967 - AO356_24270 0.30 -0.8 5,471,967 - AO356_24270 0.30 -2.2 5,472,140 + AO356_24270 0.36 +0.3 5,472,141 - AO356_24270 0.36 +1.7 5,472,336 - AO356_24270 0.42 -0.1 5,472,336 - AO356_24270 0.42 -1.3 5,472,422 + AO356_24270 0.45 -0.0 5,472,423 - AO356_24270 0.45 +0.9 5,472,423 - AO356_24270 0.45 -0.5 5,472,431 + AO356_24270 0.45 +1.3 5,472,591 - AO356_24270 0.51 +0.2 5,472,591 - AO356_24270 0.51 +0.4 5,472,591 - AO356_24270 0.51 -0.3 5,472,591 - AO356_24270 0.51 +1.2 5,472,632 + AO356_24270 0.52 -1.2 5,473,181 + AO356_24270 0.70 +0.6 5,473,181 + AO356_24270 0.70 -0.5 5,473,181 + AO356_24270 0.70 +0.4 5,473,182 - AO356_24270 0.70 +0.7 5,473,184 + AO356_24270 0.70 -0.5 5,473,222 + AO356_24270 0.71 +0.5 5,473,757 + AO356_24270 0.89 +1.3 5,473,757 + AO356_24270 0.89 -0.4 5,473,829 + +1.3 5,474,423 + AO356_24275 0.20 +0.5 5,474,423 + AO356_24275 0.20 +0.7 5,474,831 + AO356_24275 0.59 +0.5 5,474,865 - AO356_24275 0.62 -0.2 5,474,921 + AO356_24275 0.67 -0.2 5,474,921 + AO356_24275 0.67 +0.4 5,474,921 + AO356_24275 0.67 -0.2 5,474,921 + AO356_24275 0.67 -0.5 5,474,921 + AO356_24275 0.67 -0.5 5,474,922 - AO356_24275 0.68 +1.2 5,474,925 + AO356_24275 0.68 +0.1 5,474,925 + AO356_24275 0.68 -0.2 5,474,925 + AO356_24275 0.68 -0.0 5,474,966 + AO356_24275 0.72 +1.3 5,474,966 + AO356_24275 0.72 -0.5 5,474,967 - AO356_24275 0.72 -1.1
Or see this region's nucleotide sequence