Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24130 and AO356_24135 are separated by 433 nucleotides AO356_24135 and AO356_24140 are separated by 155 nucleotides
AO356_24130: AO356_24130 - NADPH-dependent FMN reductase, at 5,411,616 to 5,412,350
_24130
AO356_24135: AO356_24135 - hypothetical protein, at 5,412,784 to 5,413,722
_24135
AO356_24140: AO356_24140 - hypothetical protein, at 5,413,878 to 5,414,513
_24140
Position (kb)
5412
5413
5414 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5412.075 kb on + strand, within AO356_24130 at 5412.075 kb on + strand, within AO356_24130 at 5412.221 kb on - strand, within AO356_24130 at 5412.221 kb on - strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.226 kb on - strand, within AO356_24130 at 5412.226 kb on - strand, within AO356_24130 at 5412.232 kb on - strand, within AO356_24130 at 5412.232 kb on - strand, within AO356_24130 at 5412.285 kb on + strand at 5412.285 kb on + strand at 5412.286 kb on - strand at 5412.286 kb on - strand at 5412.379 kb on - strand at 5412.379 kb on - strand at 5412.598 kb on + strand at 5412.599 kb on - strand at 5412.660 kb on + strand at 5412.660 kb on + strand at 5412.660 kb on + strand at 5412.660 kb on + strand at 5412.660 kb on + strand at 5412.661 kb on - strand at 5412.719 kb on + strand at 5412.720 kb on - strand at 5412.720 kb on - strand at 5412.728 kb on + strand at 5412.782 kb on + strand at 5412.962 kb on + strand, within AO356_24135 at 5412.963 kb on - strand, within AO356_24135 at 5412.963 kb on - strand, within AO356_24135 at 5413.008 kb on - strand, within AO356_24135 at 5413.008 kb on - strand, within AO356_24135 at 5413.039 kb on + strand, within AO356_24135 at 5413.039 kb on + strand, within AO356_24135 at 5413.039 kb on + strand, within AO356_24135 at 5413.040 kb on - strand, within AO356_24135 at 5413.040 kb on - strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.041 kb on + strand, within AO356_24135 at 5413.042 kb on - strand, within AO356_24135 at 5413.042 kb on - strand, within AO356_24135 at 5413.045 kb on + strand, within AO356_24135 at 5413.045 kb on + strand, within AO356_24135 at 5413.045 kb on + strand, within AO356_24135 at 5413.046 kb on - strand, within AO356_24135 at 5413.046 kb on - strand, within AO356_24135 at 5413.046 kb on - strand, within AO356_24135 at 5413.046 kb on - strand, within AO356_24135 at 5413.046 kb on - strand, within AO356_24135 at 5413.236 kb on + strand, within AO356_24135 at 5413.335 kb on - strand, within AO356_24135 at 5413.366 kb on + strand, within AO356_24135 at 5413.606 kb on + strand, within AO356_24135 at 5413.746 kb on + strand at 5413.775 kb on + strand at 5413.828 kb on + strand at 5413.828 kb on + strand at 5413.828 kb on + strand at 5413.829 kb on - strand at 5413.829 kb on - strand at 5413.831 kb on - strand at 5413.831 kb on - strand at 5413.840 kb on - strand at 5413.864 kb on - strand at 5413.864 kb on - strand at 5413.910 kb on + strand at 5413.918 kb on + strand at 5413.990 kb on + strand, within AO356_24140 at 5413.999 kb on + strand, within AO356_24140 at 5413.999 kb on + strand, within AO356_24140 at 5414.000 kb on - strand, within AO356_24140 at 5414.000 kb on - strand, within AO356_24140 at 5414.089 kb on + strand, within AO356_24140 at 5414.090 kb on - strand, within AO356_24140 at 5414.093 kb on - strand, within AO356_24140 at 5414.093 kb on - strand, within AO356_24140 at 5414.239 kb on + strand, within AO356_24140 at 5414.475 kb on + strand at 5414.518 kb on - strand at 5414.564 kb on + strand at 5414.573 kb on + strand at 5414.610 kb on + strand at 5414.610 kb on + strand at 5414.611 kb on - strand at 5414.611 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 5,412,075 + AO356_24130 0.62 -0.4 5,412,075 + AO356_24130 0.62 +0.8 5,412,221 - AO356_24130 0.82 -0.3 5,412,221 - AO356_24130 0.82 -1.9 5,412,225 + AO356_24130 0.83 +0.6 5,412,225 + AO356_24130 0.83 +0.7 5,412,225 + AO356_24130 0.83 +1.1 5,412,226 - AO356_24130 0.83 +0.8 5,412,226 - AO356_24130 0.83 -1.3 5,412,232 - AO356_24130 0.84 +0.9 5,412,232 - AO356_24130 0.84 +0.4 5,412,285 + -1.7 5,412,285 + +0.4 5,412,286 - +1.4 5,412,286 - +0.1 5,412,379 - -0.1 5,412,379 - +0.6 5,412,598 + -0.9 5,412,599 - +0.2 5,412,660 + +0.1 5,412,660 + -0.6 5,412,660 + -1.1 5,412,660 + +0.8 5,412,660 + +0.3 5,412,661 - -0.2 5,412,719 + +0.1 5,412,720 - +0.8 5,412,720 - +0.5 5,412,728 + +0.8 5,412,782 + -0.4 5,412,962 + AO356_24135 0.19 +0.5 5,412,963 - AO356_24135 0.19 +0.3 5,412,963 - AO356_24135 0.19 +0.6 5,413,008 - AO356_24135 0.24 -0.4 5,413,008 - AO356_24135 0.24 -0.2 5,413,039 + AO356_24135 0.27 -0.7 5,413,039 + AO356_24135 0.27 -0.2 5,413,039 + AO356_24135 0.27 +1.9 5,413,040 - AO356_24135 0.27 +0.7 5,413,040 - AO356_24135 0.27 -0.4 5,413,041 + AO356_24135 0.27 -1.3 5,413,041 + AO356_24135 0.27 -0.9 5,413,041 + AO356_24135 0.27 -0.3 5,413,041 + AO356_24135 0.27 +1.8 5,413,041 + AO356_24135 0.27 -0.4 5,413,041 + AO356_24135 0.27 +1.1 5,413,041 + AO356_24135 0.27 +0.1 5,413,042 - AO356_24135 0.27 -0.2 5,413,042 - AO356_24135 0.27 -0.2 5,413,045 + AO356_24135 0.28 -0.7 5,413,045 + AO356_24135 0.28 +0.4 5,413,045 + AO356_24135 0.28 +0.5 5,413,046 - AO356_24135 0.28 -0.7 5,413,046 - AO356_24135 0.28 +0.7 5,413,046 - AO356_24135 0.28 +1.4 5,413,046 - AO356_24135 0.28 +2.0 5,413,046 - AO356_24135 0.28 +1.2 5,413,236 + AO356_24135 0.48 +0.4 5,413,335 - AO356_24135 0.59 -2.2 5,413,366 + AO356_24135 0.62 +0.1 5,413,606 + AO356_24135 0.88 -0.3 5,413,746 + -0.9 5,413,775 + -0.2 5,413,828 + -0.5 5,413,828 + -0.1 5,413,828 + +0.4 5,413,829 - +0.4 5,413,829 - +1.3 5,413,831 - -0.1 5,413,831 - +0.1 5,413,840 - +0.7 5,413,864 - -2.1 5,413,864 - +0.5 5,413,910 + -0.9 5,413,918 + +0.1 5,413,990 + AO356_24140 0.18 +1.1 5,413,999 + AO356_24140 0.19 +0.0 5,413,999 + AO356_24140 0.19 +1.1 5,414,000 - AO356_24140 0.19 -0.9 5,414,000 - AO356_24140 0.19 +0.3 5,414,089 + AO356_24140 0.33 +0.8 5,414,090 - AO356_24140 0.33 -1.5 5,414,093 - AO356_24140 0.34 -0.5 5,414,093 - AO356_24140 0.34 +1.0 5,414,239 + AO356_24140 0.57 +0.6 5,414,475 + -0.9 5,414,518 - -0.6 5,414,564 + +0.6 5,414,573 + +0.1 5,414,610 + +0.5 5,414,610 + -0.0 5,414,611 - -0.6 5,414,611 - -0.3
Or see this region's nucleotide sequence