Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17575 and AO356_17580 overlap by 4 nucleotides AO356_17580 and AO356_17585 are separated by 116 nucleotides AO356_17585 and AO356_17590 are separated by 6 nucleotides AO356_17590 and AO356_17595 are separated by 223 nucleotides AO356_17595 and AO356_17600 are separated by 52 nucleotides
AO356_17575: AO356_17575 - hypothetical protein, at 3,961,981 to 3,962,505
_17575
AO356_17580: AO356_17580 - Fe-S protein, at 3,962,502 to 3,962,711
_17580
AO356_17585: AO356_17585 - hypothetical protein, at 3,962,828 to 3,963,490
_17585
AO356_17590: AO356_17590 - hypothetical protein, at 3,963,497 to 3,963,727
_17590
AO356_17595: AO356_17595 - hypothetical protein, at 3,963,951 to 3,964,172
_17595
AO356_17600: AO356_17600 - glucose dehydrogenase, at 3,964,225 to 3,966,639
_17600
Position (kb)
3963
3964 Strain fitness (log2 ratio)
-2
-1
0
1 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.012 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.087 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.183 kb on + strand, within AO356_17585 at 3963.183 kb on + strand, within AO356_17585 at 3963.184 kb on - strand, within AO356_17585 at 3963.396 kb on + strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.478 kb on + strand at 3963.478 kb on + strand at 3963.479 kb on - strand at 3963.479 kb on - strand at 3963.479 kb on - strand at 3963.479 kb on - strand at 3963.531 kb on + strand, within AO356_17590 at 3963.531 kb on + strand, within AO356_17590 at 3963.531 kb on + strand, within AO356_17590 at 3963.531 kb on + strand, within AO356_17590 at 3963.532 kb on - strand, within AO356_17590 at 3963.532 kb on - strand, within AO356_17590 at 3963.623 kb on - strand, within AO356_17590 at 3963.655 kb on - strand, within AO356_17590 at 3963.655 kb on - strand, within AO356_17590 at 3963.655 kb on - strand, within AO356_17590 at 3963.655 kb on - strand, within AO356_17590 at 3963.753 kb on - strand at 3963.795 kb on + strand at 3963.795 kb on + strand at 3963.795 kb on + strand at 3963.795 kb on + strand at 3963.795 kb on + strand at 3963.796 kb on - strand at 3963.796 kb on - strand at 3963.796 kb on - strand at 3963.892 kb on + strand at 3963.893 kb on - strand at 3964.174 kb on + strand at 3964.174 kb on + strand at 3964.174 kb on + strand at 3964.174 kb on + strand at 3964.174 kb on + strand at 3964.175 kb on - strand at 3964.175 kb on - strand at 3964.175 kb on - strand at 3964.183 kb on + strand at 3964.184 kb on - strand at 3964.184 kb on - strand at 3964.184 kb on - strand at 3964.184 kb on - strand at 3964.184 kb on - strand at 3964.184 kb on - strand at 3964.201 kb on + strand at 3964.201 kb on + strand at 3964.201 kb on + strand at 3964.202 kb on - strand at 3964.202 kb on - strand at 3964.202 kb on - strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.224 kb on + strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.225 kb on - strand at 3964.262 kb on + strand at 3964.289 kb on + strand at 3964.289 kb on + strand at 3964.289 kb on + strand at 3964.289 kb on + strand at 3964.290 kb on - strand at 3964.290 kb on - strand at 3964.290 kb on - strand at 3964.290 kb on - strand at 3964.351 kb on + strand at 3964.351 kb on + strand at 3964.352 kb on - strand at 3964.354 kb on + strand at 3964.354 kb on + strand at 3964.354 kb on + strand at 3964.354 kb on + strand at 3964.355 kb on - strand at 3964.355 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 3,962,981 + AO356_17585 0.23 -0.8 3,962,981 + AO356_17585 0.23 +1.2 3,962,981 + AO356_17585 0.23 -0.8 3,962,981 + AO356_17585 0.23 +0.7 3,962,981 + AO356_17585 0.23 +0.2 3,962,981 + AO356_17585 0.23 -0.4 3,963,003 + AO356_17585 0.26 -0.1 3,963,003 + AO356_17585 0.26 -1.0 3,963,003 + AO356_17585 0.26 +0.0 3,963,004 - AO356_17585 0.27 +0.1 3,963,004 - AO356_17585 0.27 -1.0 3,963,004 - AO356_17585 0.27 +0.7 3,963,004 - AO356_17585 0.27 -0.3 3,963,004 - AO356_17585 0.27 +0.5 3,963,004 - AO356_17585 0.27 +0.2 3,963,012 + AO356_17585 0.28 -0.8 3,963,024 + AO356_17585 0.30 +1.2 3,963,024 + AO356_17585 0.30 -0.6 3,963,024 + AO356_17585 0.30 +0.8 3,963,024 + AO356_17585 0.30 -0.6 3,963,024 + AO356_17585 0.30 -0.5 3,963,024 + AO356_17585 0.30 -0.2 3,963,024 + AO356_17585 0.30 -0.8 3,963,025 - AO356_17585 0.30 +0.1 3,963,025 - AO356_17585 0.30 -0.5 3,963,025 - AO356_17585 0.30 -1.8 3,963,087 + AO356_17585 0.39 -2.6 3,963,096 + AO356_17585 0.40 +1.2 3,963,096 + AO356_17585 0.40 -0.1 3,963,096 + AO356_17585 0.40 +0.4 3,963,097 - AO356_17585 0.41 -0.4 3,963,097 - AO356_17585 0.41 -0.2 3,963,097 - AO356_17585 0.41 +0.4 3,963,122 + AO356_17585 0.44 +0.2 3,963,122 + AO356_17585 0.44 +0.1 3,963,122 + AO356_17585 0.44 -0.2 3,963,123 - AO356_17585 0.44 +0.2 3,963,123 - AO356_17585 0.44 -0.2 3,963,123 - AO356_17585 0.44 +1.0 3,963,183 + AO356_17585 0.54 +0.5 3,963,183 + AO356_17585 0.54 -0.9 3,963,184 - AO356_17585 0.54 +0.2 3,963,396 + AO356_17585 0.86 -0.5 3,963,397 - AO356_17585 0.86 +1.0 3,963,397 - AO356_17585 0.86 -0.1 3,963,397 - AO356_17585 0.86 +0.4 3,963,478 + +0.5 3,963,478 + +0.2 3,963,479 - -1.6 3,963,479 - +0.6 3,963,479 - +0.3 3,963,479 - +0.6 3,963,531 + AO356_17590 0.15 -0.3 3,963,531 + AO356_17590 0.15 +0.4 3,963,531 + AO356_17590 0.15 -0.3 3,963,531 + AO356_17590 0.15 -0.4 3,963,532 - AO356_17590 0.15 +0.1 3,963,532 - AO356_17590 0.15 +1.0 3,963,623 - AO356_17590 0.55 +0.6 3,963,655 - AO356_17590 0.68 +1.2 3,963,655 - AO356_17590 0.68 -0.4 3,963,655 - AO356_17590 0.68 +0.3 3,963,655 - AO356_17590 0.68 +0.6 3,963,753 - -1.4 3,963,795 + -0.4 3,963,795 + -1.1 3,963,795 + +0.5 3,963,795 + -1.4 3,963,795 + -0.6 3,963,796 - -0.4 3,963,796 - +0.1 3,963,796 - +0.2 3,963,892 + -0.1 3,963,893 - -0.4 3,964,174 + +0.8 3,964,174 + +0.2 3,964,174 + +1.2 3,964,174 + +0.0 3,964,174 + +0.2 3,964,175 - -0.4 3,964,175 - +0.2 3,964,175 - -0.9 3,964,183 + +0.2 3,964,184 - -0.1 3,964,184 - -0.4 3,964,184 - +0.5 3,964,184 - +0.2 3,964,184 - -0.8 3,964,184 - +0.8 3,964,201 + -0.0 3,964,201 + -0.5 3,964,201 + -0.6 3,964,202 - -0.8 3,964,202 - -0.8 3,964,202 - +0.5 3,964,224 + +0.9 3,964,224 + -0.5 3,964,224 + -0.8 3,964,224 + +0.8 3,964,224 + +0.2 3,964,224 + +1.5 3,964,224 + -0.4 3,964,225 - +0.2 3,964,225 - -0.1 3,964,225 - -1.4 3,964,225 - -0.1 3,964,225 - -1.6 3,964,225 - -0.5 3,964,225 - +1.2 3,964,262 + -0.0 3,964,289 + +0.1 3,964,289 + +0.8 3,964,289 + -0.3 3,964,289 + -0.9 3,964,290 - -0.4 3,964,290 - +0.3 3,964,290 - -0.3 3,964,290 - +0.4 3,964,351 + +0.2 3,964,351 + -0.2 3,964,352 - -0.7 3,964,354 + -1.0 3,964,354 + -1.4 3,964,354 + +0.2 3,964,354 + -0.5 3,964,355 - +1.0 3,964,355 - +0.4
Or see this region's nucleotide sequence