Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03665 and AO356_03670 overlap by 4 nucleotides AO356_03670 and AO356_03675 are separated by 41 nucleotides AO356_03675 and AO356_03680 are separated by 300 nucleotides AO356_03680 and AO356_03685 are separated by 0 nucleotides
AO356_03665: AO356_03665 - flagellar hook-length control protein FliK, at 817,038 to 818,609
_03665
AO356_03670: AO356_03670 - flagellar biosynthesis protein FlhB, at 818,606 to 818,935
_03670
AO356_03675: AO356_03675 - hypothetical protein, at 818,977 to 819,423
_03675
AO356_03680: AO356_03680 - chemotaxis protein, at 819,724 to 820,119
_03680
AO356_03685: AO356_03685 - chemotaxis protein CheW, at 820,120 to 820,605
_03685
Position (kb) 818
819
820 Strain fitness (log2 ratio) -2
-1
0
1
2 at 818.455 kb on - strand at 818.455 kb on - strand at 818.648 kb on + strand, within AO356_03670 at 818.649 kb on - strand, within AO356_03670 at 818.649 kb on - strand, within AO356_03670 at 818.674 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.736 kb on + strand, within AO356_03670 at 818.737 kb on - strand, within AO356_03670 at 818.737 kb on - strand, within AO356_03670 at 818.745 kb on - strand, within AO356_03670 at 818.814 kb on - strand, within AO356_03670 at 818.930 kb on + strand at 818.930 kb on + strand at 818.930 kb on + strand at 818.954 kb on + strand at 819.303 kb on + strand, within AO356_03675 at 819.303 kb on + strand, within AO356_03675 at 819.304 kb on - strand, within AO356_03675 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.045 kb on + strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.046 kb on - strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.049 kb on + strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.050 kb on - strand, within AO356_03680 at 820.071 kb on + strand, within AO356_03680 at 820.072 kb on - strand, within AO356_03680 at 820.072 kb on - strand, within AO356_03680 at 820.072 kb on - strand, within AO356_03680 at 820.105 kb on + strand at 820.105 kb on + strand at 820.106 kb on - strand at 820.106 kb on - strand at 820.106 kb on - strand at 820.106 kb on - strand at 820.106 kb on - strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.125 kb on + strand at 820.126 kb on - strand at 820.126 kb on - strand at 820.126 kb on - strand at 820.194 kb on + strand, within AO356_03685 at 820.281 kb on - strand, within AO356_03685 at 820.281 kb on - strand, within AO356_03685 at 820.281 kb on - strand, within AO356_03685
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 818,455 - -1.7 818,455 - -0.6 818,648 + AO356_03670 0.13 +0.4 818,649 - AO356_03670 0.13 -0.4 818,649 - AO356_03670 0.13 -0.4 818,674 + AO356_03670 0.21 -0.8 818,736 + AO356_03670 0.39 +0.5 818,736 + AO356_03670 0.39 -0.0 818,736 + AO356_03670 0.39 +0.4 818,736 + AO356_03670 0.39 -0.2 818,737 - AO356_03670 0.40 +0.2 818,737 - AO356_03670 0.40 +0.3 818,745 - AO356_03670 0.42 +0.2 818,814 - AO356_03670 0.63 +0.3 818,930 + -1.2 818,930 + -0.4 818,930 + +0.7 818,954 + +0.2 819,303 + AO356_03675 0.73 -0.8 819,303 + AO356_03675 0.73 +0.0 819,304 - AO356_03675 0.73 -0.8 820,045 + AO356_03680 0.81 +1.4 820,045 + AO356_03680 0.81 +0.8 820,045 + AO356_03680 0.81 +0.5 820,045 + AO356_03680 0.81 +0.4 820,045 + AO356_03680 0.81 -0.1 820,045 + AO356_03680 0.81 -0.2 820,045 + AO356_03680 0.81 -2.4 820,045 + AO356_03680 0.81 +0.0 820,045 + AO356_03680 0.81 +0.4 820,045 + AO356_03680 0.81 +1.0 820,045 + AO356_03680 0.81 +1.2 820,045 + AO356_03680 0.81 -1.2 820,045 + AO356_03680 0.81 +0.9 820,045 + AO356_03680 0.81 -0.4 820,045 + AO356_03680 0.81 +0.4 820,045 + AO356_03680 0.81 +1.2 820,045 + AO356_03680 0.81 +1.2 820,045 + AO356_03680 0.81 +1.6 820,045 + AO356_03680 0.81 +1.4 820,045 + AO356_03680 0.81 +0.2 820,045 + AO356_03680 0.81 +1.7 820,045 + AO356_03680 0.81 +1.3 820,046 - AO356_03680 0.81 +0.9 820,046 - AO356_03680 0.81 +0.6 820,046 - AO356_03680 0.81 +0.5 820,046 - AO356_03680 0.81 +0.4 820,046 - AO356_03680 0.81 +0.3 820,046 - AO356_03680 0.81 +0.7 820,046 - AO356_03680 0.81 +0.3 820,046 - AO356_03680 0.81 +0.0 820,046 - AO356_03680 0.81 -0.4 820,046 - AO356_03680 0.81 +1.0 820,046 - AO356_03680 0.81 +2.2 820,046 - AO356_03680 0.81 -1.4 820,046 - AO356_03680 0.81 +0.5 820,046 - AO356_03680 0.81 +0.8 820,046 - AO356_03680 0.81 +0.6 820,046 - AO356_03680 0.81 +1.3 820,046 - AO356_03680 0.81 -0.1 820,046 - AO356_03680 0.81 +1.0 820,046 - AO356_03680 0.81 -0.2 820,046 - AO356_03680 0.81 +0.5 820,046 - AO356_03680 0.81 +0.7 820,046 - AO356_03680 0.81 +1.4 820,046 - AO356_03680 0.81 +1.4 820,046 - AO356_03680 0.81 +0.2 820,049 + AO356_03680 0.82 +0.1 820,049 + AO356_03680 0.82 +0.7 820,049 + AO356_03680 0.82 +0.0 820,049 + AO356_03680 0.82 +0.0 820,049 + AO356_03680 0.82 -0.7 820,049 + AO356_03680 0.82 +0.4 820,049 + AO356_03680 0.82 +0.6 820,049 + AO356_03680 0.82 +1.4 820,049 + AO356_03680 0.82 +0.4 820,049 + AO356_03680 0.82 -1.3 820,049 + AO356_03680 0.82 +0.2 820,049 + AO356_03680 0.82 +0.3 820,050 - AO356_03680 0.82 +1.2 820,050 - AO356_03680 0.82 +2.0 820,050 - AO356_03680 0.82 -0.3 820,050 - AO356_03680 0.82 +0.2 820,050 - AO356_03680 0.82 +0.2 820,050 - AO356_03680 0.82 -0.2 820,050 - AO356_03680 0.82 -0.2 820,071 + AO356_03680 0.88 +0.1 820,072 - AO356_03680 0.88 -0.1 820,072 - AO356_03680 0.88 +0.6 820,072 - AO356_03680 0.88 +1.7 820,105 + -0.3 820,105 + +0.4 820,106 - +0.5 820,106 - +0.8 820,106 - +0.7 820,106 - +0.6 820,106 - +0.2 820,125 + +1.3 820,125 + +0.7 820,125 + +2.4 820,125 + +0.8 820,125 + +0.3 820,125 + +1.7 820,125 + +1.0 820,125 + -1.0 820,126 - +0.7 820,126 - +0.4 820,126 - +1.1 820,194 + AO356_03685 0.15 +1.4 820,281 - AO356_03685 0.33 -0.7 820,281 - AO356_03685 0.33 -0.2 820,281 - AO356_03685 0.33 +0.2
Or see this region's nucleotide sequence