Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003129

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
3,539,453	-				+2.6
3,539,453	-				-0.7
3,539,603	-				-0.5
3,539,603	-				+0.2
3,539,603	-				+0.5
3,539,616	-				+0.6
3,539,616	-				+0.0
3,539,622	-				-0.0
3,539,622	-				-1.7
3,539,622	-				+0.3
3,539,622	-				-0.1
3,539,622	-				-0.6
3,539,622	-				+1.8
3,539,622	-				+0.3
3,539,622	-				+0.9
3,540,237	+		ABIE53_003129	0.16	-0.2
3,540,237	+		ABIE53_003129	0.16	-1.5
3,540,237	+		ABIE53_003129	0.16	-1.0
3,540,260	+		ABIE53_003129	0.18	+1.4
3,540,260	+		ABIE53_003129	0.18	+0.6
3,540,260	+		ABIE53_003129	0.18	+1.2
3,540,261	-		ABIE53_003129	0.19	-1.2
3,540,261	-		ABIE53_003129	0.19	-0.0
3,540,304	+		ABIE53_003129	0.22	-1.0
3,540,304	+		ABIE53_003129	0.22	-1.7
3,540,304	+		ABIE53_003129	0.22	-0.1
3,540,304	+		ABIE53_003129	0.22	-1.6
3,540,304	+		ABIE53_003129	0.22	+0.5
3,540,304	+		ABIE53_003129	0.22	-1.4
3,540,304	+		ABIE53_003129	0.22	-0.4
3,540,304	+		ABIE53_003129	0.22	+1.7
3,540,304	+		ABIE53_003129	0.22	-0.6
3,540,304	+		ABIE53_003129	0.22	-0.2
3,540,304	+		ABIE53_003129	0.22	-1.5
3,540,305	-		ABIE53_003129	0.22	-1.2
3,540,305	-		ABIE53_003129	0.22	-0.5
3,540,305	-		ABIE53_003129	0.22	+2.8
3,540,305	-		ABIE53_003129	0.22	-0.2
3,540,305	-		ABIE53_003129	0.22	-0.7
3,540,305	-		ABIE53_003129	0.22	-0.8
3,540,305	-		ABIE53_003129	0.22	-0.6
3,540,305	-		ABIE53_003129	0.22	-1.3
3,540,305	-		ABIE53_003129	0.22	-0.0
3,540,305	-		ABIE53_003129	0.22	+0.2
3,540,305	-		ABIE53_003129	0.22	-0.9
3,540,305	-		ABIE53_003129	0.22	+0.8
3,540,306	+		ABIE53_003129	0.22	+1.1
3,540,306	+		ABIE53_003129	0.22	+0.8
3,540,306	+		ABIE53_003129	0.22	-2.2
3,540,306	+		ABIE53_003129	0.22	-0.2
3,540,306	+		ABIE53_003129	0.22	-0.9
3,540,306	+		ABIE53_003129	0.22	-0.7
3,540,307	-		ABIE53_003129	0.22	+0.2
3,540,307	-		ABIE53_003129	0.22	+0.6
3,540,307	-		ABIE53_003129	0.22	+0.2
3,540,307	-		ABIE53_003129	0.22	+1.2
3,540,307	-		ABIE53_003129	0.22	-1.4
3,540,307	-		ABIE53_003129	0.22	-0.2
3,540,308	+		ABIE53_003129	0.22	+1.6
3,540,308	+		ABIE53_003129	0.22	+0.1
3,540,308	+		ABIE53_003129	0.22	-0.3
3,540,308	+		ABIE53_003129	0.22	+0.2
3,540,308	+		ABIE53_003129	0.22	+0.8
3,540,308	+		ABIE53_003129	0.22	-0.7
3,540,308	+		ABIE53_003129	0.22	+1.2
3,540,308	+		ABIE53_003129	0.22	-0.9
3,540,308	+		ABIE53_003129	0.22	-2.0
3,540,308	+		ABIE53_003129	0.22	+1.2
3,540,308	+		ABIE53_003129	0.22	-0.9
3,540,308	+		ABIE53_003129	0.22	-0.6
3,540,308	+		ABIE53_003129	0.22	-0.9
3,540,308	+		ABIE53_003129	0.22	-0.8
3,540,308	+		ABIE53_003129	0.22	-0.4
3,540,308	+		ABIE53_003129	0.22	-1.8
3,540,308	+		ABIE53_003129	0.22	+0.7
3,540,308	+		ABIE53_003129	0.22	-0.5
3,540,308	+		ABIE53_003129	0.22	+0.4
3,540,309	-		ABIE53_003129	0.23	-0.3
3,540,309	-		ABIE53_003129	0.23	-0.4
3,540,309	-		ABIE53_003129	0.23	+1.2
3,540,309	-		ABIE53_003129	0.23	-1.1
3,540,309	-		ABIE53_003129	0.23	-0.3
3,540,309	-		ABIE53_003129	0.23	-0.4
3,540,309	-		ABIE53_003129	0.23	-2.3
3,540,309	-		ABIE53_003129	0.23	-0.8
3,540,309	-		ABIE53_003129	0.23	-1.4
3,540,309	-		ABIE53_003129	0.23	+1.6
3,540,309	-		ABIE53_003129	0.23	-0.4
3,540,309	-		ABIE53_003129	0.23	-0.5
3,540,309	-		ABIE53_003129	0.23	-1.4
3,540,309	-		ABIE53_003129	0.23	-1.5
3,540,309	-		ABIE53_003129	0.23	+0.8
3,540,309	-		ABIE53_003129	0.23	+0.2
3,540,309	-		ABIE53_003129	0.23	-0.4
3,540,309	-		ABIE53_003129	0.23	-1.7
3,540,309	-		ABIE53_003129	0.23	-0.2
3,540,309	-		ABIE53_003129	0.23	-1.4
3,540,309	-		ABIE53_003129	0.23	+2.6
3,540,309	-		ABIE53_003129	0.23	-0.2
3,540,309	-		ABIE53_003129	0.23	+0.7
3,540,309	-		ABIE53_003129	0.23	+0.8
3,540,309	-		ABIE53_003129	0.23	+0.2
3,540,309	-		ABIE53_003129	0.23	-2.7
3,540,331	+		ABIE53_003129	0.24	-0.9
3,540,331	+		ABIE53_003129	0.24	-0.7
3,540,331	+		ABIE53_003129	0.24	+0.0
3,540,331	+		ABIE53_003129	0.24	-0.4
3,540,331	+		ABIE53_003129	0.24	-1.0
3,540,331	+		ABIE53_003129	0.24	+0.4
3,540,331	+		ABIE53_003129	0.24	-0.7
3,540,331	+		ABIE53_003129	0.24	+0.2
3,540,332	-		ABIE53_003129	0.24	-0.6
3,540,332	-		ABIE53_003129	0.24	+1.8
3,540,332	-		ABIE53_003129	0.24	+1.8
3,540,332	-		ABIE53_003129	0.24	+0.6
3,540,372	+		ABIE53_003129	0.28	+0.8
3,540,372	+		ABIE53_003129	0.28	-0.8
3,540,372	+		ABIE53_003129	0.28	+1.1
3,540,372	+		ABIE53_003129	0.28	+0.6
3,540,372	+		ABIE53_003129	0.28	-0.5
3,540,372	+		ABIE53_003129	0.28	+0.4
3,540,372	+		ABIE53_003129	0.28	-1.7
3,540,372	+		ABIE53_003129	0.28	-0.2
3,540,372	+		ABIE53_003129	0.28	-0.2
3,540,372	+		ABIE53_003129	0.28	-0.1
3,540,372	+		ABIE53_003129	0.28	+0.1
3,540,372	+		ABIE53_003129	0.28	+0.2
3,540,372	+		ABIE53_003129	0.28	-1.8
3,540,372	+		ABIE53_003129	0.28	-0.7
3,540,372	+		ABIE53_003129	0.28	+0.2
3,540,372	+		ABIE53_003129	0.28	-0.9
3,540,373	-		ABIE53_003129	0.28	+0.1
3,540,373	-		ABIE53_003129	0.28	-0.5
3,540,373	-		ABIE53_003129	0.28	+0.2
3,540,373	-		ABIE53_003129	0.28	-0.3
3,540,373	-		ABIE53_003129	0.28	-0.1
3,540,373	-		ABIE53_003129	0.28	+0.8
3,540,373	-		ABIE53_003129	0.28	-0.8
3,540,373	-		ABIE53_003129	0.28	+0.8
3,540,373	-		ABIE53_003129	0.28	-1.2
3,540,373	-		ABIE53_003129	0.28	+1.4
3,540,373	-		ABIE53_003129	0.28	-0.7
3,540,373	-		ABIE53_003129	0.28	-0.1
3,540,373	-		ABIE53_003129	0.28	+0.2
3,540,373	-		ABIE53_003129	0.28	-3.0
3,540,373	-		ABIE53_003129	0.28	+0.9
3,540,373	-		ABIE53_003129	0.28	-1.3
3,540,373	-		ABIE53_003129	0.28	-0.1
3,540,373	-		ABIE53_003129	0.28	+0.2
3,540,374	-		ABIE53_003129	0.28	+1.4
3,540,430	+		ABIE53_003129	0.33	+0.4
3,540,430	+		ABIE53_003129	0.33	+0.3
3,540,430	+		ABIE53_003129	0.33	-0.6
3,540,430	+		ABIE53_003129	0.33	+0.2
3,540,430	+		ABIE53_003129	0.33	-1.8
3,540,430	+		ABIE53_003129	0.33	-0.8
3,540,430	+		ABIE53_003129	0.33	-0.7
3,540,430	+		ABIE53_003129	0.33	+0.3
3,540,431	-		ABIE53_003129	0.33	-1.2
3,540,431	-		ABIE53_003129	0.33	+0.7
3,540,431	-		ABIE53_003129	0.33	+0.2
3,540,431	-		ABIE53_003129	0.33	-2.0
3,540,431	-		ABIE53_003129	0.33	-0.2
3,540,431	-		ABIE53_003129	0.33	+0.8
3,540,455	+		ABIE53_003129	0.35	+1.6
3,540,580	+		ABIE53_003129	0.45	-0.4
3,540,580	+		ABIE53_003129	0.45	-1.2
3,540,580	+		ABIE53_003129	0.45	+0.4
3,540,580	+		ABIE53_003129	0.45	-0.2
3,540,580	+		ABIE53_003129	0.45	+1.2
3,540,580	+		ABIE53_003129	0.45	+1.8
3,540,581	-		ABIE53_003129	0.45	-0.5
3,540,581	-		ABIE53_003129	0.45	-0.3
3,540,581	-		ABIE53_003129	0.45	-1.2
3,540,581	-		ABIE53_003129	0.45	+0.1
3,540,581	-		ABIE53_003129	0.45	+0.8
3,540,581	-		ABIE53_003129	0.45	+0.9
3,540,581	-		ABIE53_003129	0.45	+0.4
3,540,581	-		ABIE53_003129	0.45	+1.1
3,540,581	-		ABIE53_003129	0.45	+1.3
3,540,670	+		ABIE53_003129	0.53	-0.2
3,540,670	+		ABIE53_003129	0.53	+0.5
3,540,670	+		ABIE53_003129	0.53	-0.4
3,540,670	+		ABIE53_003129	0.53	-0.7
3,540,671	-		ABIE53_003129	0.53	-1.1
3,540,671	-		ABIE53_003129	0.53	-0.3
3,540,671	-		ABIE53_003129	0.53	-0.0
3,540,671	-		ABIE53_003129	0.53	-1.1
3,540,692	+		ABIE53_003129	0.55	-0.8
3,540,692	+		ABIE53_003129	0.55	-0.3
3,540,692	+		ABIE53_003129	0.55	-1.2
3,540,692	+		ABIE53_003129	0.55	-0.5
3,540,692	+		ABIE53_003129	0.55	+0.9
3,540,693	-		ABIE53_003129	0.55	-0.4
3,540,693	-		ABIE53_003129	0.55	-1.2
3,540,693	-		ABIE53_003129	0.55	+1.2
3,540,693	-		ABIE53_003129	0.55	-0.3
3,540,693	-		ABIE53_003129	0.55	-1.1
3,540,767	+		ABIE53_003129	0.61	-1.0
3,540,768	-		ABIE53_003129	0.61	-0.1
3,540,779	+		ABIE53_003129	0.62	-1.3
3,540,779	+		ABIE53_003129	0.62	-1.2
3,540,779	+		ABIE53_003129	0.62	-1.0
3,540,780	-		ABIE53_003129	0.62	-0.7
3,540,780	-		ABIE53_003129	0.62	+0.6
3,540,780	-		ABIE53_003129	0.62	-0.1
3,540,780	-		ABIE53_003129	0.62	-0.0
3,540,835	+		ABIE53_003129	0.67	+0.7
3,540,836	-		ABIE53_003129	0.67	+1.8
3,540,952	+		ABIE53_003129	0.76	+1.6
3,540,952	+		ABIE53_003129	0.76	-0.5
3,540,952	+		ABIE53_003129	0.76	-0.2
3,540,952	+		ABIE53_003129	0.76	+0.6
3,540,953	-		ABIE53_003129	0.76	-2.1
3,540,953	-		ABIE53_003129	0.76	-0.6
3,540,953	-		ABIE53_003129	0.76	-0.5
3,540,953	-		ABIE53_003129	0.76	-1.1
3,540,954	+		ABIE53_003129	0.77	-1.0
3,540,955	-		ABIE53_003129	0.77	-0.6
3,541,026	+		ABIE53_003129	0.83	-0.5
3,541,026	+		ABIE53_003129	0.83	+0.3
3,541,027	-		ABIE53_003129	0.83	-0.6
3,541,027	-		ABIE53_003129	0.83	-0.8
3,541,027	-		ABIE53_003129	0.83	+0.2
3,541,027	-		ABIE53_003129	0.83	-2.6
3,541,027	-		ABIE53_003129	0.83	+0.1
3,541,027	-		ABIE53_003129	0.83	+0.8
3,541,027	-		ABIE53_003129	0.83	+0.7
3,541,040	-		ABIE53_003129	0.84	+0.4
3,541,046	+		ABIE53_003129	0.84	+1.4
3,541,049	+		ABIE53_003129	0.85	+0.9
3,541,049	+		ABIE53_003129	0.85	+1.2
3,541,049	+		ABIE53_003129	0.85	-1.2
3,541,049	+		ABIE53_003129	0.85	-0.0
3,541,049	+		ABIE53_003129	0.85	-0.2
3,541,049	+		ABIE53_003129	0.85	-0.9
3,541,049	+		ABIE53_003129	0.85	+0.4
3,541,049	+		ABIE53_003129	0.85	+1.6
3,541,049	+		ABIE53_003129	0.85	-1.2
3,541,049	+		ABIE53_003129	0.85	+0.6
3,541,050	-		ABIE53_003129	0.85	+0.2
3,541,050	-		ABIE53_003129	0.85	-0.4
3,541,050	-		ABIE53_003129	0.85	+2.0
3,541,050	-		ABIE53_003129	0.85	+3.6
3,541,050	-		ABIE53_003129	0.85	+0.3
3,541,050	-		ABIE53_003129	0.85	-1.0
3,541,050	-		ABIE53_003129	0.85	+0.4
3,541,050	-		ABIE53_003129	0.85	-0.7
3,541,192	+				-0.8
3,541,192	+				+1.6
3,541,192	+				-0.3
3,541,193	-				+2.4
3,541,208	-				+0.6
3,541,208	-				-1.4
3,541,219	+				+2.2
3,541,219	+				+0.3
3,541,219	+				-0.2
3,541,219	+				-0.6
3,541,219	+				-0.3
3,541,220	-				+0.1
3,541,220	-				+0.4
3,541,220	-				-0.7
3,541,220	-				-0.0
3,541,315	+				+0.6
3,541,315	+				-0.1
3,541,315	+				+0.3
3,541,315	+				-0.2
3,541,316	-				-0.2
3,541,322	+				+1.0
3,541,322	+				+0.4
3,541,322	+				+1.2
3,541,322	+				-0.0
3,541,322	+				-0.8
3,541,322	+				-1.1
3,541,322	+				-0.2
3,541,322	+				-0.5
3,541,322	+				-1.3
3,541,322	+				+1.2
3,541,322	+				-0.0
3,541,322	+				-0.6
3,541,322	+				-0.9
3,541,322	+				-0.4
3,541,322	+				-0.2
3,541,322	+				-0.6
3,541,322	+				-0.4
3,541,322	+				-1.1
3,541,322	+				-0.5
3,541,322	+				-0.1
3,541,322	+				+0.8
3,541,322	+				-1.3
3,541,322	+				+0.6
3,541,322	+				-0.6
3,541,322	+				-0.3
3,541,322	+				-0.5
3,541,322	+				-2.0
3,541,322	+				+0.8
3,541,322	+				+0.5
3,541,322	+				-0.1
3,541,322	+				-0.1
3,541,322	+				-1.1
3,541,323	-				+0.2
3,541,323	-				+1.6
3,541,323	-				+1.6
3,541,323	-				-0.3
3,541,323	-				-1.7
3,541,323	-				+0.4
3,541,323	-				-0.9
3,541,323	-				+1.4
3,541,323	-				-0.6
3,541,323	-				+0.4
3,541,323	-				-2.1
3,541,323	-				-0.2
3,541,323	-				-0.8
3,541,323	-				-0.1
3,541,323	-				+0.4
3,541,323	-				+0.6
3,541,323	-				-0.5
3,541,323	-				-1.2
3,541,323	-				-0.1
3,541,323	-				-1.2
3,541,323	-				-1.2
3,541,323	-				-0.6
3,541,323	-				+1.6
3,541,323	-				-0.3
3,541,323	-				-0.8
3,541,323	-				+0.1
3,541,323	-				-0.8
3,541,323	-				-1.5
3,541,323	-				-1.0
3,541,323	-				+0.6
3,541,323	-				-0.5
3,541,324	+				-0.3
3,541,324	+				-0.1
3,541,324	+				+0.3
3,541,325	-				-1.0
3,541,325	-				-0.9
3,541,330	+				+0.6
3,541,330	+				-0.5
3,541,331	-				-1.7
3,541,331	-				-1.3
3,541,490	+				+1.8
3,541,490	+				-0.1
3,541,490	+				-0.9
3,541,490	+				-0.2
3,541,490	+				-1.2
3,541,491	-				-0.3
3,541,491	-				-0.5
3,541,491	-				-0.8
3,541,491	-				+0.0
3,541,491	-				-0.5
3,541,522	+				-0.5
3,541,522	+				-0.1
3,541,522	+				-1.1
3,541,522	+				+0.6
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