Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03963 and SMc03964 are separated by 139 nucleotides SMc03964 and SMc03965 are separated by 1 nucleotides
SMc03963: SMc03963 - sulfolipid biosynthesis protein, at 2,956,906 to 2,957,832
SMc03963
SMc03964: SMc03964 - hypothetical protein, at 2,957,972 to 2,958,874
SMc03964
SMc03965: SMc03965 - Holliday junction DNA helicase RuvB, at 2,958,876 to 2,959,916
SMc03965
Position (kb)
2957
2958
2959 Strain fitness (log2 ratio)
-1
0
1
2 at 2957.097 kb on + strand, within SMc03963 at 2957.098 kb on - strand, within SMc03963 at 2957.098 kb on - strand, within SMc03963 at 2957.101 kb on + strand, within SMc03963 at 2957.101 kb on + strand, within SMc03963 at 2957.102 kb on - strand, within SMc03963 at 2957.102 kb on - strand, within SMc03963 at 2957.104 kb on + strand, within SMc03963 at 2957.105 kb on - strand, within SMc03963 at 2957.332 kb on + strand, within SMc03963 at 2957.333 kb on - strand, within SMc03963 at 2957.342 kb on + strand, within SMc03963 at 2957.422 kb on + strand, within SMc03963 at 2957.476 kb on + strand, within SMc03963 at 2957.476 kb on + strand, within SMc03963 at 2958.080 kb on - strand, within SMc03964 at 2958.080 kb on - strand, within SMc03964 at 2958.080 kb on - strand, within SMc03964 at 2958.080 kb on - strand, within SMc03964 at 2958.087 kb on + strand, within SMc03964 at 2958.087 kb on + strand, within SMc03964 at 2958.088 kb on - strand, within SMc03964 at 2958.171 kb on - strand, within SMc03964 at 2958.230 kb on + strand, within SMc03964 at 2958.230 kb on + strand, within SMc03964 at 2958.567 kb on + strand, within SMc03964 at 2958.568 kb on - strand, within SMc03964 at 2958.568 kb on - strand, within SMc03964 at 2958.598 kb on - strand, within SMc03964 at 2958.650 kb on + strand, within SMc03964 at 2958.651 kb on - strand, within SMc03964 at 2958.651 kb on - strand, within SMc03964 at 2958.759 kb on + strand, within SMc03964 at 2958.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 2,957,097 + SMc03963 0.21 +1.3 2,957,098 - SMc03963 0.21 +0.4 2,957,098 - SMc03963 0.21 +0.2 2,957,101 + SMc03963 0.21 -0.4 2,957,101 + SMc03963 0.21 +0.5 2,957,102 - SMc03963 0.21 -0.3 2,957,102 - SMc03963 0.21 +0.2 2,957,104 + SMc03963 0.21 +1.2 2,957,105 - SMc03963 0.21 -0.4 2,957,332 + SMc03963 0.46 +0.8 2,957,333 - SMc03963 0.46 +0.6 2,957,342 + SMc03963 0.47 +1.9 2,957,422 + SMc03963 0.56 +0.3 2,957,476 + SMc03963 0.61 +0.7 2,957,476 + SMc03963 0.61 -0.4 2,958,080 - SMc03964 0.12 -0.4 2,958,080 - SMc03964 0.12 +0.4 2,958,080 - SMc03964 0.12 +1.6 2,958,080 - SMc03964 0.12 +0.0 2,958,087 + SMc03964 0.13 -0.2 2,958,087 + SMc03964 0.13 -0.8 2,958,088 - SMc03964 0.13 -0.4 2,958,171 - SMc03964 0.22 +0.0 2,958,230 + SMc03964 0.29 -0.8 2,958,230 + SMc03964 0.29 +0.8 2,958,567 + SMc03964 0.66 -0.6 2,958,568 - SMc03964 0.66 +0.2 2,958,568 - SMc03964 0.66 -0.0 2,958,598 - SMc03964 0.69 -0.2 2,958,650 + SMc03964 0.75 +2.1 2,958,651 - SMc03964 0.75 -1.6 2,958,651 - SMc03964 0.75 +0.8 2,958,759 + SMc03964 0.87 +1.2 2,958,805 - -0.8
Or see this region's nucleotide sequence