Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02685 and SMc02686 are separated by 284 nucleotides SMc02686 and SMc02687 are separated by 40 nucleotides SMc02687 and SMc02688 are separated by 73 nucleotides
SMc02685: SMc02685 - hypothetical protein, at 2,534,334 to 2,535,212
SMc02685
SMc02686: SMc02686 - ribose-phosphate pyrophosphokinase, at 2,535,497 to 2,536,429
SMc02686
SMc02687: SMc02687 - hypothetical protein, at 2,536,470 to 2,537,300
SMc02687
SMc02688: SMc02688 - hypothetical protein, at 2,537,374 to 2,537,751
SMc02688
Position (kb)
2535
2536
2537 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2534.604 kb on - strand, within SMc02685 at 2534.604 kb on - strand, within SMc02685 at 2534.610 kb on + strand, within SMc02685 at 2534.610 kb on + strand, within SMc02685 at 2534.675 kb on - strand, within SMc02685 at 2534.837 kb on + strand, within SMc02685 at 2534.837 kb on + strand, within SMc02685 at 2534.838 kb on - strand, within SMc02685 at 2535.037 kb on - strand, within SMc02685 at 2535.049 kb on + strand, within SMc02685 at 2535.180 kb on + strand at 2535.181 kb on - strand at 2535.181 kb on - strand at 2535.211 kb on - strand at 2536.434 kb on + strand at 2536.490 kb on + strand at 2536.490 kb on + strand at 2536.490 kb on + strand at 2536.490 kb on + strand at 2536.490 kb on + strand at 2536.490 kb on + strand at 2536.491 kb on - strand at 2536.491 kb on - strand at 2536.491 kb on - strand at 2536.491 kb on - strand at 2536.491 kb on - strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.492 kb on + strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.493 kb on - strand at 2536.531 kb on + strand at 2536.532 kb on - strand at 2536.657 kb on + strand, within SMc02687 at 2536.658 kb on - strand, within SMc02687 at 2536.658 kb on - strand, within SMc02687 at 2536.658 kb on - strand, within SMc02687 at 2536.753 kb on + strand, within SMc02687 at 2537.097 kb on + strand, within SMc02687 at 2537.097 kb on + strand, within SMc02687
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 2,534,604 - SMc02685 0.31 -0.1 2,534,604 - SMc02685 0.31 -1.7 2,534,610 + SMc02685 0.31 +0.3 2,534,610 + SMc02685 0.31 +0.2 2,534,675 - SMc02685 0.39 +0.6 2,534,837 + SMc02685 0.57 -0.7 2,534,837 + SMc02685 0.57 -0.5 2,534,838 - SMc02685 0.57 -0.6 2,535,037 - SMc02685 0.80 -1.4 2,535,049 + SMc02685 0.81 +1.5 2,535,180 + -0.4 2,535,181 - -1.7 2,535,181 - +0.1 2,535,211 - +0.4 2,536,434 + -0.8 2,536,490 + +0.7 2,536,490 + +0.1 2,536,490 + +1.1 2,536,490 + +1.0 2,536,490 + +0.4 2,536,490 + -1.0 2,536,491 - +0.4 2,536,491 - -0.1 2,536,491 - +1.4 2,536,491 - +3.0 2,536,491 - +1.0 2,536,492 + +1.3 2,536,492 + -0.5 2,536,492 + -1.4 2,536,492 + -1.5 2,536,492 + -0.6 2,536,492 + -0.2 2,536,492 + +1.0 2,536,492 + +0.5 2,536,492 + -0.5 2,536,493 - +3.2 2,536,493 - -0.1 2,536,493 - +0.0 2,536,493 - -1.7 2,536,493 - +1.0 2,536,493 - +0.5 2,536,493 - +1.8 2,536,493 - -0.8 2,536,531 + +0.6 2,536,532 - +0.3 2,536,657 + SMc02687 0.23 -0.7 2,536,658 - SMc02687 0.23 -1.9 2,536,658 - SMc02687 0.23 +0.5 2,536,658 - SMc02687 0.23 -1.0 2,536,753 + SMc02687 0.34 -1.7 2,537,097 + SMc02687 0.75 -1.5 2,537,097 + SMc02687 0.75 -0.5
Or see this region's nucleotide sequence