Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00510 and SMc00509 overlap by 1 nucleotides SMc00509 and SMc00508 are separated by 63 nucleotides SMc00508 and SMc00507 are separated by 221 nucleotides SMc00507 and SMc00506 are separated by 73 nucleotides
SMc00510: SMc00510 - hypothetical protein, at 1,902,546 to 1,903,283
SMc00510
SMc00509: SMc00509 - hypothetical protein, at 1,903,283 to 1,903,840
SMc00509
SMc00508: SMc00508 - adenylosuccinate lyase, at 1,903,904 to 1,905,211
SMc00508
SMc00507: SMc00507 - hypothetical protein, at 1,905,433 to 1,905,771
SMc00507
SMc00506: SMc00506 - hypothetical protein, at 1,905,845 to 1,906,654
SMc00506
Position (kb)
1903
1904
1905
1906 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1902.933 kb on + strand, within SMc00510 at 1902.933 kb on + strand, within SMc00510 at 1902.933 kb on + strand, within SMc00510 at 1902.934 kb on - strand, within SMc00510 at 1902.934 kb on - strand, within SMc00510 at 1902.972 kb on + strand, within SMc00510 at 1902.973 kb on - strand, within SMc00510 at 1902.973 kb on - strand, within SMc00510 at 1902.973 kb on - strand, within SMc00510 at 1903.093 kb on + strand, within SMc00510 at 1903.093 kb on + strand, within SMc00510 at 1903.456 kb on + strand, within SMc00509 at 1903.457 kb on - strand, within SMc00509 at 1903.646 kb on + strand, within SMc00509 at 1903.659 kb on - strand, within SMc00509 at 1903.734 kb on - strand, within SMc00509 at 1903.767 kb on + strand, within SMc00509 at 1903.767 kb on + strand, within SMc00509 at 1903.767 kb on + strand, within SMc00509 at 1903.768 kb on - strand, within SMc00509 at 1903.792 kb on - strand at 1903.792 kb on - strand at 1903.860 kb on + strand at 1903.860 kb on + strand at 1905.214 kb on - strand at 1905.414 kb on + strand at 1905.415 kb on - strand at 1905.473 kb on - strand, within SMc00507 at 1905.473 kb on - strand, within SMc00507 at 1905.518 kb on + strand, within SMc00507 at 1905.751 kb on + strand at 1905.752 kb on - strand at 1905.755 kb on - strand at 1905.755 kb on - strand at 1905.883 kb on - strand at 1906.196 kb on - strand, within SMc00506
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 1,902,933 + SMc00510 0.52 +0.4 1,902,933 + SMc00510 0.52 +2.0 1,902,933 + SMc00510 0.52 +2.6 1,902,934 - SMc00510 0.53 -0.5 1,902,934 - SMc00510 0.53 -0.3 1,902,972 + SMc00510 0.58 +0.6 1,902,973 - SMc00510 0.58 -0.1 1,902,973 - SMc00510 0.58 +0.6 1,902,973 - SMc00510 0.58 -2.3 1,903,093 + SMc00510 0.74 -0.2 1,903,093 + SMc00510 0.74 +0.1 1,903,456 + SMc00509 0.31 +0.2 1,903,457 - SMc00509 0.31 -0.5 1,903,646 + SMc00509 0.65 +0.3 1,903,659 - SMc00509 0.67 +0.3 1,903,734 - SMc00509 0.81 +0.4 1,903,767 + SMc00509 0.87 +2.5 1,903,767 + SMc00509 0.87 -0.2 1,903,767 + SMc00509 0.87 +0.2 1,903,768 - SMc00509 0.87 +0.4 1,903,792 - +0.9 1,903,792 - +0.6 1,903,860 + +0.4 1,903,860 + -0.6 1,905,214 - +1.0 1,905,414 + -0.3 1,905,415 - -0.4 1,905,473 - SMc00507 0.12 -0.4 1,905,473 - SMc00507 0.12 -0.7 1,905,518 + SMc00507 0.25 -1.2 1,905,751 + +0.2 1,905,752 - -0.3 1,905,755 - +0.3 1,905,755 - -0.5 1,905,883 - +1.3 1,906,196 - SMc00506 0.43 -2.3
Or see this region's nucleotide sequence