Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2127 and SMa2129 are separated by 32 nucleotides SMa2129 and SMa2131 are separated by 245 nucleotides
SMa2127: SMa2127 - ABC transporter ATP-binding protein, at 1,201,708 to 1,203,258
SMa2127
SMa2129: SMa2129 - hypothetical protein, at 1,203,291 to 1,204,310
SMa2129
SMa2131: SMa2131 - hypothetical protein, at 1,204,556 to 1,205,452
SMa2131
Position (kb)
1203
1204
1205 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1202.302 kb on + strand, within SMa2127 at 1202.796 kb on - strand, within SMa2127 at 1202.962 kb on - strand, within SMa2127 at 1203.049 kb on + strand, within SMa2127 at 1203.099 kb on - strand, within SMa2127 at 1203.099 kb on - strand, within SMa2127 at 1203.099 kb on - strand, within SMa2127 at 1203.101 kb on + strand, within SMa2127 at 1203.101 kb on + strand, within SMa2127 at 1203.276 kb on - strand at 1203.276 kb on - strand at 1203.437 kb on + strand, within SMa2129 at 1203.438 kb on - strand, within SMa2129 at 1203.438 kb on - strand, within SMa2129 at 1203.470 kb on - strand, within SMa2129 at 1203.553 kb on - strand, within SMa2129 at 1203.554 kb on + strand, within SMa2129 at 1203.591 kb on - strand, within SMa2129 at 1203.874 kb on + strand, within SMa2129 at 1203.875 kb on - strand, within SMa2129 at 1203.875 kb on - strand, within SMa2129 at 1203.875 kb on - strand, within SMa2129 at 1203.898 kb on + strand, within SMa2129 at 1203.898 kb on + strand, within SMa2129 at 1203.907 kb on + strand, within SMa2129 at 1203.908 kb on - strand, within SMa2129 at 1203.908 kb on - strand, within SMa2129 at 1203.988 kb on - strand, within SMa2129 at 1204.019 kb on + strand, within SMa2129 at 1204.020 kb on - strand, within SMa2129 at 1204.105 kb on - strand, within SMa2129 at 1204.105 kb on - strand, within SMa2129 at 1204.105 kb on - strand, within SMa2129 at 1204.305 kb on - strand at 1204.305 kb on - strand at 1204.310 kb on + strand at 1204.310 kb on + strand at 1204.311 kb on - strand at 1204.311 kb on - strand at 1204.311 kb on - strand at 1204.311 kb on - strand at 1204.311 kb on - strand at 1204.311 kb on - strand at 1204.315 kb on + strand at 1204.316 kb on - strand at 1204.334 kb on + strand at 1204.335 kb on - strand at 1204.499 kb on - strand at 1204.523 kb on + strand at 1204.721 kb on - strand, within SMa2131 at 1204.777 kb on + strand, within SMa2131 at 1204.777 kb on + strand, within SMa2131 at 1204.778 kb on - strand, within SMa2131 at 1204.778 kb on - strand, within SMa2131 at 1204.783 kb on + strand, within SMa2131 at 1204.784 kb on - strand, within SMa2131 at 1204.784 kb on - strand, within SMa2131 at 1204.869 kb on + strand, within SMa2131 at 1204.903 kb on - strand, within SMa2131 at 1204.909 kb on - strand, within SMa2131 at 1205.013 kb on + strand, within SMa2131 at 1205.013 kb on + strand, within SMa2131 at 1205.030 kb on - strand, within SMa2131
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 1,202,302 + SMa2127 0.38 +0.2 1,202,796 - SMa2127 0.70 +1.0 1,202,962 - SMa2127 0.81 +0.1 1,203,049 + SMa2127 0.86 +0.2 1,203,099 - SMa2127 0.90 -0.3 1,203,099 - SMa2127 0.90 -0.6 1,203,099 - SMa2127 0.90 -0.9 1,203,101 + SMa2127 0.90 +0.2 1,203,101 + SMa2127 0.90 +0.8 1,203,276 - -0.7 1,203,276 - +0.0 1,203,437 + SMa2129 0.14 -0.8 1,203,438 - SMa2129 0.14 -0.1 1,203,438 - SMa2129 0.14 -1.3 1,203,470 - SMa2129 0.18 +1.3 1,203,553 - SMa2129 0.26 -1.5 1,203,554 + SMa2129 0.26 +0.8 1,203,591 - SMa2129 0.29 +1.0 1,203,874 + SMa2129 0.57 +2.4 1,203,875 - SMa2129 0.57 -1.0 1,203,875 - SMa2129 0.57 +1.2 1,203,875 - SMa2129 0.57 -1.3 1,203,898 + SMa2129 0.60 -0.2 1,203,898 + SMa2129 0.60 +0.1 1,203,907 + SMa2129 0.60 +0.2 1,203,908 - SMa2129 0.60 +0.1 1,203,908 - SMa2129 0.60 +0.0 1,203,988 - SMa2129 0.68 +6.7 1,204,019 + SMa2129 0.71 +0.8 1,204,020 - SMa2129 0.71 +0.3 1,204,105 - SMa2129 0.80 -0.8 1,204,105 - SMa2129 0.80 +0.5 1,204,105 - SMa2129 0.80 -1.0 1,204,305 - +0.4 1,204,305 - -1.0 1,204,310 + -0.3 1,204,310 + -0.6 1,204,311 - +1.4 1,204,311 - -0.2 1,204,311 - -0.3 1,204,311 - -0.6 1,204,311 - +0.5 1,204,311 - -0.1 1,204,315 + -0.0 1,204,316 - -0.0 1,204,334 + +2.1 1,204,335 - +0.7 1,204,499 - +0.3 1,204,523 + -0.4 1,204,721 - SMa2131 0.18 +0.2 1,204,777 + SMa2131 0.25 -0.6 1,204,777 + SMa2131 0.25 -1.8 1,204,778 - SMa2131 0.25 -0.5 1,204,778 - SMa2131 0.25 -0.9 1,204,783 + SMa2131 0.25 +0.2 1,204,784 - SMa2131 0.25 -0.4 1,204,784 - SMa2131 0.25 -0.4 1,204,869 + SMa2131 0.35 +1.5 1,204,903 - SMa2131 0.39 -0.8 1,204,909 - SMa2131 0.39 -0.1 1,205,013 + SMa2131 0.51 +0.2 1,205,013 + SMa2131 0.51 -2.2 1,205,030 - SMa2131 0.53 -1.6
Or see this region's nucleotide sequence