Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21171 and SM_b21172 overlap by 35 nucleotides SM_b21172 and SM_b21173 are separated by 79 nucleotides SM_b21173 and SM_b21174 overlap by 4 nucleotides
SM_b21171: SM_b21171 - enzyme protein, at 917,431 to 918,570
_b21171
SM_b21172: SM_b21172 - hypothetical protein, at 918,536 to 919,345
_b21172
SM_b21173: SM_b21173 - hypothetical protein, at 919,425 to 919,616
_b21173
SM_b21174: SM_b21174 - phosphate uptake ABC transporter permease, at 919,613 to 921,130
_b21174
Position (kb) 918
919
920 Strain fitness (log2 ratio) -1
0
1
2 at 917.660 kb on + strand, within SM_b21171 at 917.745 kb on + strand, within SM_b21171 at 917.945 kb on + strand, within SM_b21171 at 917.945 kb on + strand, within SM_b21171 at 918.021 kb on - strand, within SM_b21171 at 918.024 kb on - strand, within SM_b21171 at 918.033 kb on - strand, within SM_b21171 at 918.033 kb on - strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.428 kb on + strand, within SM_b21171 at 918.429 kb on - strand, within SM_b21171 at 918.760 kb on + strand, within SM_b21172 at 918.761 kb on - strand, within SM_b21172 at 918.795 kb on + strand, within SM_b21172 at 918.796 kb on - strand, within SM_b21172 at 918.802 kb on - strand, within SM_b21172 at 918.996 kb on + strand, within SM_b21172 at 919.157 kb on + strand, within SM_b21172 at 919.157 kb on + strand, within SM_b21172 at 919.272 kb on + strand at 919.501 kb on + strand, within SM_b21173 at 919.502 kb on - strand, within SM_b21173 at 919.517 kb on + strand, within SM_b21173 at 919.699 kb on + strand at 919.699 kb on + strand at 919.702 kb on - strand at 919.752 kb on - strand at 920.331 kb on + strand, within SM_b21174
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 917,660 + SM_b21171 0.20 +2.0 917,745 + SM_b21171 0.28 +0.9 917,945 + SM_b21171 0.45 +1.2 917,945 + SM_b21171 0.45 -1.2 918,021 - SM_b21171 0.52 +0.2 918,024 - SM_b21171 0.52 +0.1 918,033 - SM_b21171 0.53 +0.4 918,033 - SM_b21171 0.53 +0.5 918,122 + SM_b21171 0.61 -0.2 918,122 + SM_b21171 0.61 -0.3 918,122 + SM_b21171 0.61 -0.0 918,428 + SM_b21171 0.87 +0.6 918,429 - SM_b21171 0.88 -0.0 918,760 + SM_b21172 0.28 -0.1 918,761 - SM_b21172 0.28 -0.0 918,795 + SM_b21172 0.32 +0.2 918,796 - SM_b21172 0.32 +1.4 918,802 - SM_b21172 0.33 -0.2 918,996 + SM_b21172 0.57 +0.8 919,157 + SM_b21172 0.77 +0.5 919,157 + SM_b21172 0.77 -0.6 919,272 + -1.0 919,501 + SM_b21173 0.40 -0.5 919,502 - SM_b21173 0.40 -0.3 919,517 + SM_b21173 0.48 -0.5 919,699 + -0.0 919,699 + +1.7 919,702 - +1.7 919,752 - -0.6 920,331 + SM_b21174 0.47 -0.1
Or see this region's nucleotide sequence