Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20470 and SM_b20471 are separated by 30 nucleotides SM_b20471 and SM_b20472 are separated by 13 nucleotides
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
SM_b20471: SM_b20471 - hypothetical protein, at 484,417 to 484,566
_b20471
SM_b20472: SM_b20472 - nodulation protein, at 484,580 to 486,412
_b20472
Position (kb) 484
485 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 483.453 kb on + strand at 483.454 kb on - strand at 483.468 kb on + strand at 483.479 kb on + strand at 483.479 kb on + strand at 483.480 kb on - strand at 483.509 kb on + strand at 483.546 kb on + strand at 483.546 kb on + strand at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.328 kb on - strand, within SM_b20470 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.447 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.585 kb on + strand at 484.585 kb on + strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.590 kb on + strand at 484.595 kb on - strand at 484.608 kb on - strand at 484.721 kb on + strand at 484.722 kb on - strand at 484.722 kb on - strand at 484.776 kb on - strand, within SM_b20472 at 484.776 kb on - strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.914 kb on - strand, within SM_b20472 at 484.917 kb on + strand, within SM_b20472 at 484.918 kb on - strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.104 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.157 kb on - strand, within SM_b20472 at 485.159 kb on + strand, within SM_b20472 at 485.160 kb on - strand, within SM_b20472 at 485.189 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.192 kb on - strand, within SM_b20472 at 485.214 kb on - strand, within SM_b20472
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 483,453 + -0.4 483,454 - +0.0 483,468 + +0.5 483,479 + -0.8 483,479 + +0.2 483,480 - +0.1 483,509 + -1.3 483,546 + +0.0 483,546 + -0.5 483,626 + +1.8 483,709 + +0.7 483,823 - -2.0 483,823 - -0.7 483,852 + -0.3 484,023 + SM_b20470 0.16 +0.8 484,024 - SM_b20470 0.16 -1.9 484,047 + SM_b20470 0.21 +0.8 484,083 - SM_b20470 0.30 +0.7 484,193 + SM_b20470 0.55 -2.4 484,193 + SM_b20470 0.55 -0.3 484,194 - SM_b20470 0.55 -2.3 484,194 - SM_b20470 0.55 -0.7 484,194 - SM_b20470 0.55 -0.3 484,198 - SM_b20470 0.56 -0.1 484,198 - SM_b20470 0.56 -0.8 484,198 - SM_b20470 0.56 -0.5 484,198 - SM_b20470 0.56 +0.2 484,198 - SM_b20470 0.56 -0.2 484,237 + SM_b20470 0.65 +0.6 484,238 - SM_b20470 0.66 -1.0 484,238 - SM_b20470 0.66 -1.6 484,257 + SM_b20470 0.70 +0.6 484,327 + SM_b20470 0.86 -1.8 484,327 + SM_b20470 0.86 -0.2 484,327 + SM_b20470 0.86 +0.0 484,328 - SM_b20470 0.86 +0.8 484,444 + SM_b20471 0.18 +0.5 484,444 + SM_b20471 0.18 +0.3 484,444 + +1.6 484,444 + SM_b20471 0.18 +1.1 484,444 + SM_b20471 0.18 +1.0 484,445 - SM_b20471 0.19 +0.3 484,445 - SM_b20471 0.19 -0.2 484,445 - SM_b20471 0.19 -1.8 484,445 - SM_b20471 0.19 +0.2 484,445 - SM_b20471 0.19 +1.1 484,447 - +1.3 484,553 - -0.9 484,553 - -1.1 484,553 - -1.2 484,585 + -0.4 484,585 + -0.1 484,586 - -1.0 484,586 - -0.2 484,586 - +0.5 484,586 - -0.3 484,586 - +0.8 484,590 + -1.5 484,595 - -0.7 484,608 - +2.1 484,721 + -0.8 484,722 - +1.0 484,722 - +1.0 484,776 - SM_b20472 0.11 -1.0 484,776 - SM_b20472 0.11 -0.1 484,817 + SM_b20472 0.13 -0.7 484,817 + SM_b20472 0.13 -1.2 484,818 - SM_b20472 0.13 -0.5 484,818 - SM_b20472 0.13 -0.7 484,914 - SM_b20472 0.18 +0.1 484,917 + SM_b20472 0.18 -0.4 484,918 - SM_b20472 0.18 +2.3 485,100 + SM_b20472 0.28 +1.6 485,100 + SM_b20472 0.28 -1.9 485,101 - SM_b20472 0.28 -0.5 485,101 - SM_b20472 0.28 -1.2 485,104 + SM_b20472 0.29 -0.4 485,156 + SM_b20472 0.31 -1.2 485,156 + SM_b20472 0.31 +0.0 485,157 - SM_b20472 0.31 +0.9 485,159 + SM_b20472 0.32 +1.0 485,160 - SM_b20472 0.32 +0.8 485,189 + SM_b20472 0.33 -0.6 485,191 + SM_b20472 0.33 -0.7 485,191 + SM_b20472 0.33 -0.5 485,192 - SM_b20472 0.33 +0.5 485,214 - SM_b20472 0.35 -2.9
Or see this region's nucleotide sequence