Experiment: perchlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20388 and SM_b20389 are separated by 14 nucleotides SM_b20389 and SM_b20390 are separated by 435 nucleotides
SM_b20388: SM_b20388 - NADPH:quinone oxidoreductase, at 399,980 to 400,960
_b20388
SM_b20389: SM_b20389 - hypothetical protein, at 400,975 to 402,000
_b20389
SM_b20390: SM_b20390 - hypothetical protein, at 402,436 to 403,668
_b20390
Position (kb) 400
401
402
403 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 399.981 kb on + strand at 399.981 kb on + strand at 399.982 kb on - strand at 400.066 kb on - strand at 400.066 kb on - strand at 400.158 kb on + strand, within SM_b20388 at 400.158 kb on + strand, within SM_b20388 at 400.159 kb on - strand, within SM_b20388 at 400.193 kb on + strand, within SM_b20388 at 400.220 kb on + strand, within SM_b20388 at 400.228 kb on + strand, within SM_b20388 at 400.228 kb on + strand, within SM_b20388 at 400.265 kb on + strand, within SM_b20388 at 400.311 kb on - strand at 400.377 kb on + strand, within SM_b20388 at 400.378 kb on - strand, within SM_b20388 at 400.450 kb on + strand, within SM_b20388 at 400.451 kb on - strand, within SM_b20388 at 400.464 kb on + strand, within SM_b20388 at 400.489 kb on - strand, within SM_b20388 at 400.539 kb on - strand, within SM_b20388 at 400.613 kb on + strand, within SM_b20388 at 400.614 kb on - strand, within SM_b20388 at 400.614 kb on - strand, within SM_b20388 at 400.615 kb on - strand, within SM_b20388 at 400.659 kb on + strand, within SM_b20388 at 400.659 kb on + strand, within SM_b20388 at 400.856 kb on + strand, within SM_b20388 at 400.856 kb on + strand, within SM_b20388 at 400.856 kb on + strand, within SM_b20388 at 400.856 kb on + strand, within SM_b20388 at 400.857 kb on - strand, within SM_b20388 at 400.857 kb on - strand, within SM_b20388 at 400.857 kb on - strand, within SM_b20388 at 401.643 kb on - strand, within SM_b20389 at 401.690 kb on + strand, within SM_b20389 at 401.690 kb on + strand, within SM_b20389 at 401.690 kb on + strand, within SM_b20389 at 401.690 kb on + strand, within SM_b20389 at 401.690 kb on + strand, within SM_b20389 at 401.691 kb on - strand, within SM_b20389 at 401.691 kb on - strand, within SM_b20389 at 401.691 kb on - strand, within SM_b20389 at 401.691 kb on - strand, within SM_b20389 at 401.691 kb on - strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.770 kb on + strand, within SM_b20389 at 401.771 kb on - strand, within SM_b20389 at 401.771 kb on - strand, within SM_b20389 at 401.862 kb on - strand, within SM_b20389 at 402.005 kb on - strand at 402.005 kb on - strand at 402.081 kb on + strand at 402.112 kb on - strand at 402.119 kb on - strand at 402.217 kb on + strand at 402.234 kb on - strand at 402.238 kb on + strand at 402.238 kb on + strand at 402.323 kb on + strand at 402.372 kb on - strand at 402.399 kb on - strand at 402.399 kb on - strand at 402.462 kb on + strand at 402.462 kb on + strand at 402.463 kb on - strand at 402.527 kb on - strand at 402.527 kb on - strand at 402.548 kb on + strand at 402.549 kb on - strand at 402.569 kb on + strand, within SM_b20390
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 10 mM remove 399,981 + -1.3 399,981 + -0.3 399,982 - +1.2 400,066 - +0.8 400,066 - +0.0 400,158 + SM_b20388 0.18 +0.7 400,158 + SM_b20388 0.18 -0.5 400,159 - SM_b20388 0.18 -0.5 400,193 + SM_b20388 0.22 -1.2 400,220 + SM_b20388 0.24 -1.8 400,228 + SM_b20388 0.25 +0.6 400,228 + SM_b20388 0.25 +0.2 400,265 + SM_b20388 0.29 -1.8 400,311 - +0.0 400,377 + SM_b20388 0.40 +2.1 400,378 - SM_b20388 0.41 +0.4 400,450 + SM_b20388 0.48 -0.0 400,451 - SM_b20388 0.48 -0.3 400,464 + SM_b20388 0.49 +0.2 400,489 - SM_b20388 0.52 +0.4 400,539 - SM_b20388 0.57 +0.5 400,613 + SM_b20388 0.65 -1.7 400,614 - SM_b20388 0.65 +0.3 400,614 - SM_b20388 0.65 +0.6 400,615 - SM_b20388 0.65 +0.2 400,659 + SM_b20388 0.69 +0.1 400,659 + SM_b20388 0.69 +0.9 400,856 + SM_b20388 0.89 -0.3 400,856 + SM_b20388 0.89 +0.5 400,856 + SM_b20388 0.89 +0.4 400,856 + SM_b20388 0.89 -0.8 400,857 - SM_b20388 0.89 -0.6 400,857 - SM_b20388 0.89 -1.2 400,857 - SM_b20388 0.89 +0.7 401,643 - SM_b20389 0.65 +0.6 401,690 + SM_b20389 0.70 +0.9 401,690 + SM_b20389 0.70 -0.7 401,690 + SM_b20389 0.70 -0.8 401,690 + SM_b20389 0.70 -0.7 401,690 + SM_b20389 0.70 -0.7 401,691 - SM_b20389 0.70 +0.5 401,691 - SM_b20389 0.70 -1.4 401,691 - SM_b20389 0.70 +1.3 401,691 - SM_b20389 0.70 -1.9 401,691 - SM_b20389 0.70 -0.1 401,770 + SM_b20389 0.77 +0.1 401,770 + SM_b20389 0.77 -0.9 401,770 + SM_b20389 0.77 +0.2 401,770 + SM_b20389 0.77 -2.3 401,770 + SM_b20389 0.77 -1.9 401,770 + SM_b20389 0.77 +0.3 401,771 - SM_b20389 0.78 +0.3 401,771 - SM_b20389 0.78 +0.1 401,862 - SM_b20389 0.86 -1.2 402,005 - -0.2 402,005 - -0.9 402,081 + +0.1 402,112 - +0.4 402,119 - -0.6 402,217 + -0.0 402,234 - +0.1 402,238 + -3.1 402,238 + +0.8 402,323 + -0.4 402,372 - -0.0 402,399 - -1.0 402,399 - -1.3 402,462 + +0.0 402,462 + +0.9 402,463 - +0.3 402,527 - +0.5 402,527 - +0.3 402,548 + -1.6 402,549 - -0.0 402,569 + SM_b20390 0.11 +0.6
Or see this region's nucleotide sequence