Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS25125 and RR42_RS25130 are separated by 307 nucleotides RR42_RS25130 and RR42_RS25135 are separated by 845 nucleotides
RR42_RS25125: RR42_RS25125 - 3-oxoacyl-ACP reductase, at 973,905 to 974,654
_RS25125
RR42_RS25130: RR42_RS25130 - pyruvate carboxylase, at 974,962 to 978,465
_RS25130
RR42_RS25135: RR42_RS25135 - transcriptional regulator, at 979,311 to 980,219
_RS25135
Position (kb) 974
975
976
977
978
979 Strain fitness (log2 ratio) -2
-1
0
1
2 at 974.200 kb on - strand, within RR42_RS25125 at 974.200 kb on - strand, within RR42_RS25125 at 974.200 kb on - strand, within RR42_RS25125 at 974.537 kb on + strand, within RR42_RS25125 at 974.537 kb on + strand, within RR42_RS25125 at 974.537 kb on + strand, within RR42_RS25125 at 974.565 kb on - strand, within RR42_RS25125 at 974.565 kb on - strand, within RR42_RS25125 at 974.968 kb on + strand at 974.969 kb on - strand at 975.118 kb on + strand at 975.119 kb on - strand at 975.569 kb on - strand, within RR42_RS25130 at 975.569 kb on - strand, within RR42_RS25130 at 975.603 kb on - strand, within RR42_RS25130 at 975.649 kb on + strand, within RR42_RS25130 at 975.664 kb on - strand, within RR42_RS25130 at 975.779 kb on - strand, within RR42_RS25130 at 975.832 kb on + strand, within RR42_RS25130 at 975.833 kb on - strand, within RR42_RS25130 at 976.156 kb on + strand, within RR42_RS25130 at 976.184 kb on - strand, within RR42_RS25130 at 976.508 kb on + strand, within RR42_RS25130 at 976.509 kb on - strand, within RR42_RS25130 at 976.633 kb on - strand, within RR42_RS25130 at 976.705 kb on + strand, within RR42_RS25130 at 976.706 kb on - strand, within RR42_RS25130 at 976.885 kb on + strand, within RR42_RS25130 at 976.885 kb on + strand, within RR42_RS25130 at 977.004 kb on - strand, within RR42_RS25130 at 977.078 kb on - strand, within RR42_RS25130 at 977.078 kb on - strand, within RR42_RS25130 at 977.089 kb on + strand, within RR42_RS25130 at 977.090 kb on - strand, within RR42_RS25130 at 977.090 kb on - strand, within RR42_RS25130 at 977.432 kb on - strand, within RR42_RS25130 at 977.452 kb on + strand, within RR42_RS25130 at 977.455 kb on + strand, within RR42_RS25130 at 977.455 kb on + strand, within RR42_RS25130 at 977.455 kb on + strand, within RR42_RS25130 at 977.456 kb on - strand, within RR42_RS25130 at 977.953 kb on + strand, within RR42_RS25130 at 977.995 kb on + strand, within RR42_RS25130 at 977.998 kb on - strand, within RR42_RS25130 at 978.003 kb on + strand, within RR42_RS25130 at 978.003 kb on + strand, within RR42_RS25130 at 978.003 kb on + strand, within RR42_RS25130 at 978.015 kb on - strand, within RR42_RS25130 at 978.404 kb on + strand at 978.405 kb on - strand at 978.497 kb on + strand at 978.669 kb on + strand at 978.763 kb on - strand at 978.804 kb on + strand at 978.892 kb on + strand at 978.892 kb on + strand at 978.930 kb on - strand at 979.083 kb on - strand at 979.102 kb on + strand at 979.103 kb on - strand at 979.124 kb on + strand at 979.125 kb on - strand at 979.136 kb on + strand at 979.179 kb on - strand at 979.179 kb on - strand at 979.189 kb on + strand at 979.189 kb on + strand at 979.189 kb on + strand at 979.190 kb on - strand at 979.190 kb on - strand at 979.238 kb on - strand at 979.247 kb on - strand at 979.274 kb on + strand at 979.274 kb on + strand at 979.275 kb on - strand at 979.285 kb on + strand at 979.296 kb on + strand at 979.327 kb on + strand at 979.328 kb on - strand at 979.368 kb on - strand at 979.427 kb on + strand, within RR42_RS25135
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 974,200 - RR42_RS25125 0.39 +0.4 974,200 - RR42_RS25125 0.39 -0.4 974,200 - RR42_RS25125 0.39 +0.1 974,537 + RR42_RS25125 0.84 -0.8 974,537 + RR42_RS25125 0.84 +0.2 974,537 + RR42_RS25125 0.84 -0.2 974,565 - RR42_RS25125 0.88 +0.4 974,565 - RR42_RS25125 0.88 +0.5 974,968 + -0.4 974,969 - -0.2 975,118 + -0.4 975,119 - -0.5 975,569 - RR42_RS25130 0.17 -0.1 975,569 - RR42_RS25130 0.17 -0.6 975,603 - RR42_RS25130 0.18 -0.5 975,649 + RR42_RS25130 0.20 -1.6 975,664 - RR42_RS25130 0.20 +0.8 975,779 - RR42_RS25130 0.23 +0.1 975,832 + RR42_RS25130 0.25 -0.0 975,833 - RR42_RS25130 0.25 -0.5 976,156 + RR42_RS25130 0.34 +0.2 976,184 - RR42_RS25130 0.35 -0.2 976,508 + RR42_RS25130 0.44 +1.2 976,509 - RR42_RS25130 0.44 +1.3 976,633 - RR42_RS25130 0.48 -0.5 976,705 + RR42_RS25130 0.50 -0.5 976,706 - RR42_RS25130 0.50 +0.4 976,885 + RR42_RS25130 0.55 +0.2 976,885 + RR42_RS25130 0.55 +0.3 977,004 - RR42_RS25130 0.58 +0.2 977,078 - RR42_RS25130 0.60 +0.5 977,078 - RR42_RS25130 0.60 -0.4 977,089 + RR42_RS25130 0.61 +0.2 977,090 - RR42_RS25130 0.61 -0.7 977,090 - RR42_RS25130 0.61 -1.2 977,432 - RR42_RS25130 0.70 -1.4 977,452 + RR42_RS25130 0.71 +0.1 977,455 + RR42_RS25130 0.71 +0.8 977,455 + RR42_RS25130 0.71 +0.2 977,455 + RR42_RS25130 0.71 +0.8 977,456 - RR42_RS25130 0.71 -0.4 977,953 + RR42_RS25130 0.85 -0.4 977,995 + RR42_RS25130 0.87 -0.2 977,998 - RR42_RS25130 0.87 +0.1 978,003 + RR42_RS25130 0.87 -0.9 978,003 + RR42_RS25130 0.87 +0.3 978,003 + RR42_RS25130 0.87 +0.7 978,015 - RR42_RS25130 0.87 +0.3 978,404 + +0.1 978,405 - -0.5 978,497 + +0.1 978,669 + -1.1 978,763 - -1.0 978,804 + -0.5 978,892 + +0.2 978,892 + +0.5 978,930 - +0.2 979,083 - -0.9 979,102 + +1.8 979,103 - -0.3 979,124 + +0.1 979,125 - -2.2 979,136 + +0.7 979,179 - +0.2 979,179 - -0.3 979,189 + -0.9 979,189 + -1.8 979,189 + -0.1 979,190 - +0.3 979,190 - -0.2 979,238 - -0.3 979,247 - -0.3 979,274 + +0.3 979,274 + +0.5 979,275 - +0.1 979,285 + +0.4 979,296 + -0.4 979,327 + +0.3 979,328 - -1.1 979,368 - -0.2 979,427 + RR42_RS25135 0.13 -0.3
Or see this region's nucleotide sequence