Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33030
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 2,987,215 | + | +0.2 | |||
| 2,987,215 | + | -0.4 | |||
| 2,987,299 | + | +0.3 | |||
| 2,987,369 | + | BPHYT_RS33025 | 0.13 | -0.2 | |
| 2,987,778 | + | BPHYT_RS33025 | 0.63 | -1.6 | |
| 2,987,778 | + | BPHYT_RS33025 | 0.63 | -0.2 | |
| 2,987,849 | - | BPHYT_RS33025 | 0.72 | +0.6 | |
| 2,987,993 | + | BPHYT_RS33025 | 0.90 | +0.4 | |
| 2,987,998 | + | -0.2 | |||
| 2,987,998 | + | -0.1 | |||
| 2,988,614 | + | BPHYT_RS33030 | 0.53 | -1.2 | |
| 2,989,325 | + | BPHYT_RS33035 | 0.27 | -0.1 | |
| 2,989,561 | + | BPHYT_RS33035 | 0.50 | +0.8 | |
| 2,989,760 | + | BPHYT_RS33035 | 0.70 | +0.8 |
Or see this region's nucleotide sequence