Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03095 and BPHYT_RS03100 overlap by 31 nucleotides BPHYT_RS03100 and BPHYT_RS03105 are separated by 137 nucleotides
BPHYT_RS03095: BPHYT_RS03095 - alpha/beta hydrolase, at 692,694 to 693,650
_RS03095
BPHYT_RS03100: BPHYT_RS03100 - peptidase, at 693,620 to 694,462
_RS03100
BPHYT_RS03105: BPHYT_RS03105 - DSBA oxidoreductase, at 694,600 to 696,195
_RS03105
Position (kb) 693
694
695 Strain fitness (log2 ratio) -2
-1
0
1 at 692.621 kb on - strand at 692.621 kb on - strand at 692.621 kb on - strand at 692.659 kb on - strand at 692.958 kb on + strand, within BPHYT_RS03095 at 692.958 kb on + strand, within BPHYT_RS03095 at 692.959 kb on - strand, within BPHYT_RS03095 at 692.992 kb on + strand, within BPHYT_RS03095 at 692.992 kb on + strand, within BPHYT_RS03095 at 693.039 kb on + strand, within BPHYT_RS03095 at 693.040 kb on - strand, within BPHYT_RS03095 at 693.651 kb on + strand at 693.652 kb on - strand at 693.679 kb on - strand at 693.749 kb on - strand, within BPHYT_RS03100 at 693.951 kb on + strand, within BPHYT_RS03100 at 694.537 kb on + strand at 694.537 kb on + strand at 694.556 kb on - strand at 694.644 kb on - strand at 694.738 kb on - strand at 694.771 kb on + strand, within BPHYT_RS03105 at 694.792 kb on + strand, within BPHYT_RS03105 at 694.793 kb on - strand at 694.793 kb on - strand, within BPHYT_RS03105 at 694.843 kb on + strand, within BPHYT_RS03105 at 694.846 kb on + strand, within BPHYT_RS03105 at 695.046 kb on - strand, within BPHYT_RS03105 at 695.113 kb on + strand, within BPHYT_RS03105 at 695.113 kb on + strand, within BPHYT_RS03105 at 695.113 kb on + strand, within BPHYT_RS03105 at 695.114 kb on - strand, within BPHYT_RS03105
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 692,621 - +0.8 692,621 - +0.4 692,621 - +0.1 692,659 - +0.3 692,958 + BPHYT_RS03095 0.28 +0.4 692,958 + BPHYT_RS03095 0.28 +0.4 692,959 - BPHYT_RS03095 0.28 -0.4 692,992 + BPHYT_RS03095 0.31 -0.2 692,992 + BPHYT_RS03095 0.31 +0.7 693,039 + BPHYT_RS03095 0.36 +0.5 693,040 - BPHYT_RS03095 0.36 +0.3 693,651 + +0.3 693,652 - +0.1 693,679 - +0.7 693,749 - BPHYT_RS03100 0.15 -0.4 693,951 + BPHYT_RS03100 0.39 -1.1 694,537 + -0.1 694,537 + -0.1 694,556 - -0.6 694,644 - +0.1 694,738 - -0.0 694,771 + BPHYT_RS03105 0.11 -2.1 694,792 + BPHYT_RS03105 0.12 +0.5 694,793 - -0.2 694,793 - BPHYT_RS03105 0.12 +0.1 694,843 + BPHYT_RS03105 0.15 +0.4 694,846 + BPHYT_RS03105 0.15 +0.1 695,046 - BPHYT_RS03105 0.28 +0.2 695,113 + BPHYT_RS03105 0.32 +0.1 695,113 + BPHYT_RS03105 0.32 -0.7 695,113 + BPHYT_RS03105 0.32 -0.5 695,114 - BPHYT_RS03105 0.32 +0.1
Or see this region's nucleotide sequence