Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29640 and AO356_29645 overlap by 4 nucleotides AO356_29645 and AO356_29650 overlap by 4 nucleotides AO356_29650 and AO356_29655 are separated by 61 nucleotides AO356_29655 and AO356_29660 are separated by 164 nucleotides
AO356_29640: AO356_29640 - FAD-dependent oxidoreductase, at 6,896,124 to 6,897,413
_29640
AO356_29645: AO356_29645 - glutamine ABC transporter ATP-binding protein, at 6,897,410 to 6,898,156
_29645
AO356_29650: AO356_29650 - amino acid ABC transporter permease, at 6,898,153 to 6,898,809
_29650
AO356_29655: AO356_29655 - ABC transporter substrate-binding protein, at 6,898,871 to 6,899,629
_29655
AO356_29660: AO356_29660 - IclR family transcriptional regulator, at 6,899,794 to 6,900,570
_29660
Position (kb)
6898
6899 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6897.489 kb on - strand, within AO356_29645 at 6897.842 kb on + strand, within AO356_29645 at 6897.847 kb on - strand, within AO356_29645 at 6897.847 kb on - strand, within AO356_29645 at 6898.000 kb on - strand, within AO356_29645 at 6898.000 kb on - strand, within AO356_29645 at 6898.070 kb on + strand, within AO356_29645 at 6898.071 kb on - strand, within AO356_29645 at 6898.071 kb on - strand, within AO356_29645 at 6898.139 kb on - strand at 6898.251 kb on - strand, within AO356_29650 at 6898.251 kb on - strand, within AO356_29650 at 6898.370 kb on + strand, within AO356_29650 at 6898.592 kb on + strand, within AO356_29650 at 6898.597 kb on - strand, within AO356_29650 at 6898.598 kb on + strand, within AO356_29650 at 6898.598 kb on + strand, within AO356_29650 at 6898.599 kb on - strand, within AO356_29650 at 6898.599 kb on - strand, within AO356_29650 at 6898.599 kb on - strand, within AO356_29650 at 6898.777 kb on - strand at 6898.777 kb on - strand at 6898.809 kb on + strand at 6899.014 kb on - strand, within AO356_29655 at 6899.062 kb on - strand, within AO356_29655 at 6899.143 kb on - strand, within AO356_29655 at 6899.247 kb on + strand, within AO356_29655 at 6899.289 kb on + strand, within AO356_29655 at 6899.290 kb on - strand, within AO356_29655 at 6899.310 kb on + strand, within AO356_29655 at 6899.311 kb on - strand, within AO356_29655 at 6899.545 kb on - strand, within AO356_29655 at 6899.624 kb on - strand at 6899.634 kb on + strand at 6899.635 kb on - strand at 6899.655 kb on - strand at 6899.663 kb on - strand at 6899.663 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 6,897,489 - AO356_29645 0.11 -2.8 6,897,842 + AO356_29645 0.58 +1.0 6,897,847 - AO356_29645 0.59 -1.2 6,897,847 - AO356_29645 0.59 +0.2 6,898,000 - AO356_29645 0.79 +1.5 6,898,000 - AO356_29645 0.79 -2.4 6,898,070 + AO356_29645 0.88 -3.4 6,898,071 - AO356_29645 0.88 +1.0 6,898,071 - AO356_29645 0.88 +0.6 6,898,139 - +1.4 6,898,251 - AO356_29650 0.15 -2.3 6,898,251 - AO356_29650 0.15 +1.7 6,898,370 + AO356_29650 0.33 +0.2 6,898,592 + AO356_29650 0.67 -2.8 6,898,597 - AO356_29650 0.68 -2.3 6,898,598 + AO356_29650 0.68 +0.2 6,898,598 + AO356_29650 0.68 -0.2 6,898,599 - AO356_29650 0.68 -2.3 6,898,599 - AO356_29650 0.68 +0.6 6,898,599 - AO356_29650 0.68 -0.0 6,898,777 - -0.5 6,898,777 - +0.4 6,898,809 + +3.0 6,899,014 - AO356_29655 0.19 +0.4 6,899,062 - AO356_29655 0.25 +0.6 6,899,143 - AO356_29655 0.36 -0.5 6,899,247 + AO356_29655 0.50 -0.3 6,899,289 + AO356_29655 0.55 -0.2 6,899,290 - AO356_29655 0.55 -2.8 6,899,310 + AO356_29655 0.58 -2.4 6,899,311 - AO356_29655 0.58 +1.1 6,899,545 - AO356_29655 0.89 +0.7 6,899,624 - -1.0 6,899,634 + +1.4 6,899,635 - -0.7 6,899,655 - +2.5 6,899,663 - -1.8 6,899,663 - +0.5
Or see this region's nucleotide sequence